RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 PTPRGP23470 1445 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 HIBCHQ6NVY1 386 aaPredicted RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 LONRF3Q496Y0 759 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 NRBP1Q9UHY1 535 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 MSH6P52701 1360 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 ATP8B2P98198 1209 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 CEP70Q8NHQ1 597 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 MRPL46Q9H2W6 279 aaKnown RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 SOS1Q07889 1333 aaPredicted RBP15.18■□□□□ 0.02
CHD1-212ENST00000614616 CSGALNACT2Q8N6G5 542 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CTNND1O60716 968 aaKnown RBP15.18■□□□□ 0.02
CHD1-212ENST00000614616 GOLGA8QA0A0J9YX86 632 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 GOLGA8OA6NCC3 632 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 GOLGA8NF8WBI6 632 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 PDHA1P08559 390 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 ELF1P32519 619 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.18■□□□□ 0.02
CHD1-212ENST00000614616 SNX16P57768 344 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 NELFBQ8WX92 580 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 AMFRQ9UKV5 643 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CALM1P0DP23 149 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CALM2P0DP24 149 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CALM3P0DP25 149 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 PLCD1P51178 756 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 SFMBT2Q5VUG0 894 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 MSANTD4Q8NCY6 345 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 ESR2Q92731 530 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CHGBP05060 677 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CYP2C19P33261 490 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 CRYMQ14894 314 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 KMT5BQ4FZB7 885 aa15.18■□□□□ 0.02
CHD1-212ENST00000614616 GUCY2DQ02846 1103 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 GEN1Q17RS7 908 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 DCAF17Q5H9S7 520 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 VWA3AA6NCI4 1184 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 THAP12O43422 761 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 GJC1P36383 396 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 GNAQP50148 359 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 NNTQ13423 1086 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 APLFQ8IW19 511 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 CCT6BQ92526 530 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 CRCPO75575 148 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 GRK7Q8WTQ7 553 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 MYD88Q99836 296 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.17■□□□□ 0.02
CHD1-212ENST00000614616 CUL3Q13618 768 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
CHD1-212ENST00000614616 TYW1BQ6NUM6 668 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 MYH3P11055 1940 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 NUP160Q12769 1436 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 MAGEA1P43355 309 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 C2CD5Q86YS7 1000 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHD1-212ENST00000614616 MAPK13O15264 365 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 EEF1DP29692 281 aaKnown RBP15.16■□□□□ 0.02
CHD1-212ENST00000614616 CACTINQ8WUQ7 758 aaKnown RBP15.16■□□□□ 0.02
CHD1-212ENST00000614616 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 CACNA1FO60840 1977 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
CHD1-212ENST00000614616 KCNK3O14649 394 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 EIF3BP55884 814 aaKnown RBP15.15■□□□□ 0.02
CHD1-212ENST00000614616 PIP4K2CQ8TBX8 421 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 DCTN3O75935 186 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 SV2BQ7L1I2 683 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 DONSONQ9NYP3 566 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 UGGT2Q9NYU1 1516 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 SLC27A2O14975 620 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 TRIML1Q8N9V2 468 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.15■□□□□ 0.02
CHD1-212ENST00000614616 ARHGAP4P98171 946 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 SDCCAG3Q96C92 435 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 TTC21BQ7Z4L5 1316 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 TSPY2A6NKD2 308 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 INPP1P49441 399 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 PNOCQ13519 176 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 KRT12Q99456 494 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 EPN1Q9Y6I3 576 aaPredicted RBP15.15■□□□□ 0.02
CHD1-212ENST00000614616 CCDC93Q567U6 631 aa15.15■□□□□ 0.02
CHD1-212ENST00000614616 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
CHD1-212ENST00000614616 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
CHD1-212ENST00000614616 FGFR1OP2Q9NVK5 253 aa15.14■□□□□ 0.01
CHD1-212ENST00000614616 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
CHD1-212ENST00000614616 GNA14O95837 355 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms