RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 NUP133Q8WUM0 1156 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 POTECB2RU33 542 aa20.52■□□□□ 0.88
SREK1-216ENST00000612404 SHROOM1Q2M3G4 852 aaPredicted RBP20.52■□□□□ 0.88
SREK1-216ENST00000612404 SULF1Q8IWU6 871 aa20.52■□□□□ 0.88
SREK1-216ENST00000612404 PPP2R3BQ9Y5P8 575 aa20.52■□□□□ 0.88
SREK1-216ENST00000612404 WDR90Q96KV7 1748 aa20.52■□□□□ 0.87
SREK1-216ENST00000612404 GOLGA8AA7E2F4 631 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 MTMR4Q9NYA4 1195 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 RRP1BQ14684 758 aaKnown RBP20.51■□□□□ 0.87
SREK1-216ENST00000612404 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 CABP5Q9NP86 173 aa20.51■□□□□ 0.87
SREK1-216ENST00000612404 IGKV6D-41A0A0C4DH26 115 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 DHX16O60231 1041 aaKnown RBP20.5■□□□□ 0.87
SREK1-216ENST00000612404 GH2P01242 217 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 ATP2B2Q01814 1243 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 PNMA8AQ86V59 439 aaPredicted RBP20.5■□□□□ 0.87
SREK1-216ENST00000612404 PNMA1Q8ND90 353 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 CPLX1O14810 134 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 ZC3H15Q8WU90 426 aaKnown RBP20.5■□□□□ 0.87
SREK1-216ENST00000612404 CHMP4CQ96CF2 233 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 HOOK2Q96ED9 719 aa20.5■□□□□ 0.87
SREK1-216ENST00000612404 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
SREK1-216ENST00000612404 ADM5C9JUS6 153 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 TTLL1O95922 423 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 SEPT2Q15019 361 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 DCAF15Q66K64 600 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 MTMR7Q9Y216 660 aa20.49■□□□□ 0.87
SREK1-216ENST00000612404 DDAH1O94760 285 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
SREK1-216ENST00000612404 ADD1P35611 737 aaKnown RBP20.48■□□□□ 0.87
SREK1-216ENST00000612404 JAG1P78504 1218 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 RTN1Q16799 776 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 FANCBQ8NB91 859 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 GREB1LQ9C091 1923 aaPredicted RBP20.48■□□□□ 0.87
SREK1-216ENST00000612404 CALM1P0DP23 149 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 CALM2P0DP24 149 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 CALM3P0DP25 149 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 CDC27P30260 824 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 RCAN1P53805 252 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 TROAPQ12815 778 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 KANSL2Q9H9L4 492 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SREK1-216ENST00000612404 JAK2O60674 1132 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 PPFIA3O75145 1194 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 GJB2P29033 226 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 SUPT20HL1Q3ZLR7 823 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 DLK2Q6UY11 383 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
SREK1-216ENST00000612404 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 GUCY1A2P33402 732 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 CAP2P40123 477 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 NOVP48745 357 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 ICA1Q05084 483 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
SREK1-216ENST00000612404 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
SREK1-216ENST00000612404 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
SREK1-216ENST00000612404 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
SREK1-216ENST00000612404 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
SREK1-216ENST00000612404 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
SREK1-216ENST00000612404 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
SREK1-216ENST00000612404 CPLX2Q6PUV4 134 aaKnown RBP20.46■□□□□ 0.87
SREK1-216ENST00000612404 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
SREK1-216ENST00000612404 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
SREK1-216ENST00000612404 ZNF341Q9BYN7 854 aa20.46■□□□□ 0.87
SREK1-216ENST00000612404 FAM217BQ9NTX9 383 aaPredicted RBP20.46■□□□□ 0.87
SREK1-216ENST00000612404 ZBTB21Q9ULJ3 1066 aa20.46■□□□□ 0.87
SREK1-216ENST00000612404 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
SREK1-216ENST00000612404 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
SREK1-216ENST00000612404 DDIT3P35638 169 aa20.45■□□□□ 0.86
SREK1-216ENST00000612404 FZD1Q9UP38 647 aa20.45■□□□□ 0.86
SREK1-216ENST00000612404 NID2Q14112 1375 aa20.45■□□□□ 0.86
SREK1-216ENST00000612404 MYH4Q9Y623 1939 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 CDKL5O76039 1030 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 POTEIP0CG38 1075 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 PRKG1Q13976 671 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 PPP2R5BQ15173 497 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 CCDC82Q8N4S0 544 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 GLIS2Q9BZE0 524 aaPredicted RBP20.44■□□□□ 0.86
SREK1-216ENST00000612404 RBM28Q9NW13 759 aaKnown RBP20.44■□□□□ 0.86
SREK1-216ENST00000612404 CHMP5Q9NZZ3 219 aa20.44■□□□□ 0.86
SREK1-216ENST00000612404 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.44■□□□□ 0.86
SREK1-216ENST00000612404 SSC5DA1L4H1 1573 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 RAD21O60216 631 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 ASNSP08243 561 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 KIF5BP33176 963 aa20.43■□□□□ 0.86
SREK1-216ENST00000612404 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms