RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 USP17L15C9J2P7 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L13C9JLJ4 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L11C9JVI0 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L18D6R9N7 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L22D6RA61 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L17D6RBQ6 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L19D6RCP7 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L20D6RJB6 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 RGS2P41220 211 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 USP17L24Q0WX57 530 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 CCL14Q16627 93 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 CERKLQ49MI3 558 aaPredicted RBP20.37■□□□□ 0.85
TVP23A-210ENST00000612195 TTC6Q86TZ1 520 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 ACER1Q8TDN7 264 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 GDF15Q99988 308 aa20.37■□□□□ 0.85
TVP23A-210ENST00000612195 CNMDO75829 334 aa20.36■□□□□ 0.85
TVP23A-210ENST00000612195 ABCB5Q2M3G0 1257 aa20.36■□□□□ 0.85
TVP23A-210ENST00000612195 ERC1Q8IUD2 1116 aa20.36■□□□□ 0.85
TVP23A-210ENST00000612195 LRCH3Q96II8 777 aa20.36■□□□□ 0.85
TVP23A-210ENST00000612195 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
TVP23A-210ENST00000612195 RABGAP1Q9Y3P9 1069 aa20.36■□□□□ 0.85
TVP23A-210ENST00000612195 CCND3P30281 292 aaPredicted RBP20.35■□□□□ 0.85
TVP23A-210ENST00000612195 SHMT1P34896 483 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 PLCD1P51178 756 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 USP14P54578 494 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
TVP23A-210ENST00000612195 CATSPERGQ6ZRH7 1159 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 PANK1Q8TE04 598 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 KIAA1683Q9H0B3 1180 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 CWC22Q9HCG8 908 aaKnown RBP20.35■□□□□ 0.85
TVP23A-210ENST00000612195 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
TVP23A-210ENST00000612195 LAMA2P24043 3122 aaKnown RBP20.34■□□□□ 0.85
TVP23A-210ENST00000612195 PFASO15067 1338 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 SYN1P17600 705 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 VCAM1P19320 739 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 BMP8BP34820 402 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 LHX8Q68G74 356 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 APBA2Q99767 749 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 CABP5Q9NP86 173 aa20.34■□□□□ 0.85
TVP23A-210ENST00000612195 MAGEB6P1A0A0J9YX57 407 aa20.33■□□□□ 0.85
TVP23A-210ENST00000612195 POLR3DP05423 398 aaPredicted RBP20.33■□□□□ 0.85
TVP23A-210ENST00000612195 GUCY1A2P33402 732 aa20.33■□□□□ 0.85
TVP23A-210ENST00000612195 CCNA1P78396 465 aa20.33■□□□□ 0.85
TVP23A-210ENST00000612195 WDR78Q5VTH9 848 aa20.33■□□□□ 0.85
TVP23A-210ENST00000612195 EDC3Q96F86 508 aaKnown RBP20.33■□□□□ 0.85
TVP23A-210ENST00000612195 GLRX3O76003 335 aaKnown RBP20.32■□□□□ 0.84
TVP23A-210ENST00000612195 COL6A1P12109 1028 aa20.32■□□□□ 0.84
TVP23A-210ENST00000612195 EVX2Q03828 476 aa20.32■□□□□ 0.84
TVP23A-210ENST00000612195 SLC9C2Q5TAH2 1124 aa20.32■□□□□ 0.84
TVP23A-210ENST00000612195 RHPN1Q8TCX5 695 aa20.32■□□□□ 0.84
TVP23A-210ENST00000612195 BTBD7Q9P203 1132 aa20.32■□□□□ 0.84
TVP23A-210ENST00000612195 PDE6AP16499 860 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 PTPREP23469 700 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 MAGEA10P43363 369 aaPredicted RBP20.31■□□□□ 0.84
TVP23A-210ENST00000612195 SEPT2Q15019 361 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 TTF1Q15361 905 aaPredicted RBP20.31■□□□□ 0.84
TVP23A-210ENST00000612195 LBX2Q6XYB7 198 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 MIER1Q8N108 512 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 RPAP3Q9H6T3 665 aaPredicted RBP20.31■□□□□ 0.84
TVP23A-210ENST00000612195 MCM9Q9NXL9 1143 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 FLRT1Q9NZU1 646 aa20.31■□□□□ 0.84
TVP23A-210ENST00000612195 NAV1Q8NEY1 1877 aa20.3■□□□□ 0.84
TVP23A-210ENST00000612195 SLC15A5A6NIM6 579 aa20.3■□□□□ 0.84
TVP23A-210ENST00000612195 APBB1O00213 710 aa20.3■□□□□ 0.84
TVP23A-210ENST00000612195 GABPAQ06546 454 aa20.3■□□□□ 0.84
TVP23A-210ENST00000612195 HSP90AB4PQ58FF6 505 aa20.3■□□□□ 0.84
TVP23A-210ENST00000612195 CRNKL1Q9BZJ0 848 aaKnown RBP20.3■□□□□ 0.84
TVP23A-210ENST00000612195 SPDYE16A6NNV3 312 aaPredicted RBP20.29■□□□□ 0.84
TVP23A-210ENST00000612195 GOLIM4O00461 696 aa20.29■□□□□ 0.84
TVP23A-210ENST00000612195 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
TVP23A-210ENST00000612195 LRRC26Q2I0M4 334 aa20.29■□□□□ 0.84
TVP23A-210ENST00000612195 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
TVP23A-210ENST00000612195 ZNF532Q9HCE3 1301 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 A0A1W2PRG0 241 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 TCRBV5S4A2TA0A5A2 114 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 GRB14Q14449 540 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
TVP23A-210ENST00000612195 SDR42E1Q8WUS8 393 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
TVP23A-210ENST00000612195 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 IVNS1ABPQ9Y6Y0 642 aa20.28■□□□□ 0.84
TVP23A-210ENST00000612195 HOXC6P09630 235 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 CYP2D6P10635 497 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.27■□□□□ 0.84
TVP23A-210ENST00000612195 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 UBE2OQ9C0C9 1292 aaKnown RBP20.27■□□□□ 0.84
TVP23A-210ENST00000612195 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
TVP23A-210ENST00000612195 FRMPD3Q5JV73 1810 aa20.27■□□□□ 0.84
TVP23A-210ENST00000612195 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
TVP23A-210ENST00000612195 COG2Q14746 738 aa20.26■□□□□ 0.83
TVP23A-210ENST00000612195 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
TVP23A-210ENST00000612195 SLC44A5Q8NCS7 719 aa20.26■□□□□ 0.83
TVP23A-210ENST00000612195 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
TVP23A-210ENST00000612195 CNGA1P29973 690 aa20.25■□□□□ 0.83
TVP23A-210ENST00000612195 CYP2C19P33261 490 aa20.25■□□□□ 0.83
TVP23A-210ENST00000612195 LRIT3Q3SXY7 679 aa20.25■□□□□ 0.83
TVP23A-210ENST00000612195 SIRT2Q8IXJ6 389 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms