RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
FARP1-240ENST00000602263 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
FARP1-240ENST00000602263 CCNA1P78396 465 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 TRIM32Q13049 653 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
FARP1-240ENST00000602263 GPR142Q7Z601 462 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 PLEKHH3Q7Z736 793 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
FARP1-240ENST00000602263 KIF1BPQ96EK5 621 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 RABGAP1Q9Y3P9 1069 aa12.69□□□□□ -0.38
FARP1-240ENST00000602263 LAMA3Q16787 3333 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 A0A1W2PPC1 479 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 APBB1O00213 710 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 PEX10O60683 326 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
FARP1-240ENST00000602263 PDE6AP16499 860 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 SLC9C2Q5TAH2 1124 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
FARP1-240ENST00000602263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.68□□□□□ -0.38
FARP1-240ENST00000602263 DNAJC2Q99543 621 aaKnown RBP12.68□□□□□ -0.38
FARP1-240ENST00000602263 APBA2Q99767 749 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 RIOK1Q9BRS2 568 aaKnown RBP12.68□□□□□ -0.38
FARP1-240ENST00000602263 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 PORCNQ9H237 461 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
FARP1-240ENST00000602263 GOLIM4O00461 696 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 VCAM1P19320 739 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 Q3C1V9 767 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 C7orf61Q8IZ16 206 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 PRO3102Q9H379 93 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
FARP1-240ENST00000602263 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
FARP1-240ENST00000602263 ZNF532Q9HCE3 1301 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
FARP1-240ENST00000602263 SHMT1P34896 483 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 PLCD1P51178 756 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 MORN1Q5T089 497 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 IVNS1ABPQ9Y6Y0 642 aa12.66□□□□□ -0.38
FARP1-240ENST00000602263 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
FARP1-240ENST00000602263 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 LBX2Q6XYB7 198 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 USP6NLQ92738 828 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.38
FARP1-240ENST00000602263 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
FARP1-240ENST00000602263 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
FARP1-240ENST00000602263 ZMYND8Q9ULU4 1186 aaPredicted RBP12.65□□□□□ -0.38
FARP1-240ENST00000602263 ZNFX1Q9P2E3 1918 aaKnown RBP12.64□□□□□ -0.39
FARP1-240ENST00000602263 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
FARP1-240ENST00000602263 CNMDO75829 334 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 CCND3P30281 292 aaPredicted RBP12.64□□□□□ -0.39
FARP1-240ENST00000602263 GABPAQ06546 454 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 SEPT2Q15019 361 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 CCL14Q16627 93 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 AMOTL1Q8IY63 956 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 EDC3Q96F86 508 aaKnown RBP12.64□□□□□ -0.39
FARP1-240ENST00000602263 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 TANGO6Q9C0B7 1094 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 ZNF236Q9UL36 1845 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 RLFQ13129 1914 aa12.64□□□□□ -0.39
FARP1-240ENST00000602263 A0A0G2JMZ2 1700 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 PTPREP23469 700 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
FARP1-240ENST00000602263 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
FARP1-240ENST00000602263 ZBTB40Q9NUA8 1239 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 PAG1Q9NWQ8 432 aa12.63□□□□□ -0.39
FARP1-240ENST00000602263 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms