RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 CALM1P0DP23 149 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 CALM2P0DP24 149 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 CALM3P0DP25 149 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 ARMCX5Q6P1M9 558 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 MLKLQ8NB16 471 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
PSMC4-206ENST00000601697 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 RBM28Q9NW13 759 aaKnown RBP16.14■□□□□ 0.17
PSMC4-206ENST00000601697 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
PSMC4-206ENST00000601697 FBXO2Q9UK22 296 aaPredicted RBP16.14■□□□□ 0.17
PSMC4-206ENST00000601697 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
PSMC4-206ENST00000601697 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 POSTNQ15063 836 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 LONRF3Q496Y0 759 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 FCHSD1Q86WN1 690 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 NUP133Q8WUM0 1156 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 ARID3AQ99856 593 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
PSMC4-206ENST00000601697 CT47A1Q5JQC4 288 aaPredicted RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 ISM2Q6H9L7 571 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 RIOK1Q9BRS2 568 aaKnown RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 ANKIB1Q9P2G1 1089 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 CACNA1SQ13698 1873 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 TNKSO95271 1327 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 XDHP47989 1333 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 MINDY4BA8MYZ0 360 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 SLU7O95391 586 aaKnown RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 NT5DC1Q5TFE4 455 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
PSMC4-206ENST00000601697 VSTM4Q8IW00 320 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
PSMC4-206ENST00000601697 GUCY1A2P33402 732 aa16.11■□□□□ 0.17
PSMC4-206ENST00000601697 KRT2P35908 639 aa16.11■□□□□ 0.17
PSMC4-206ENST00000601697 TOB1P50616 345 aaPredicted RBP16.11■□□□□ 0.17
PSMC4-206ENST00000601697 SEC23AQ15436 765 aa16.11■□□□□ 0.17
PSMC4-206ENST00000601697 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
PSMC4-206ENST00000601697 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
PSMC4-206ENST00000601697 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
PSMC4-206ENST00000601697 RBM17Q96I25 401 aaKnown RBP16.11■□□□□ 0.17
PSMC4-206ENST00000601697 MAST2Q6P0Q8 1798 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 TRIM75PA6NK02 468 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 DDAH1O94760 285 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
PSMC4-206ENST00000601697 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
PSMC4-206ENST00000601697 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
PSMC4-206ENST00000601697 HSD3B7Q9H2F3 369 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 LAMB1P07942 1786 aa16.1■□□□□ 0.17
PSMC4-206ENST00000601697 GOLGA6L9A6NEM1 432 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 POLR2DO15514 142 aaKnown RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 IGSF3O75054 1194 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 MECOMQ03112 1051 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 DDR1Q08345 913 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 ENOX1Q8TC92 643 aaKnown RBP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
PSMC4-206ENST00000601697 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
PSMC4-206ENST00000601697 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.17
PSMC4-206ENST00000601697 NT5C2P49902 561 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 MORC3Q14149 939 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.17
PSMC4-206ENST00000601697 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 HOMER1Q86YM7 354 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 FERMT2Q96AC1 680 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 FANCLQ9NW38 375 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 OGFRQ9NZT2 677 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.17
PSMC4-206ENST00000601697 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
PSMC4-206ENST00000601697 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
PSMC4-206ENST00000601697 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.16
PSMC4-206ENST00000601697 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.16
PSMC4-206ENST00000601697 NR5A1Q13285 461 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms