RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PRPF6	O94906	941 aa	Known RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MARCKS	P29966	332 aa	Predicted RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ADD2	P35612	726 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	DDR1	Q08345	913 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	AIMP1	Q12904	312 aa	Known RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LRRC31	Q6UY01	552 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MICALL1	Q8N3F8	863 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	IGDCC4	Q8TDY8	1250 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EDC3	Q96F86	508 aa	Known RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	DNAJC7	Q99615	494 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NACAP1	Q9BZK3	213 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CUEDC2	Q9H467	287 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FAM204A	Q9H8W3	233 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MRPL44	Q9H9J2	332 aa	Known RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RBM28	Q9NW13	759 aa	Known RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FAN1	Q9Y2M0	1017 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TJP1	Q07157	1748 aa		13.24	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MYH7	P12883	1935 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236		M0R2C6	588 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	POLR2D	O15514	142 aa	Known RBP	13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	BMP6	P22004	513 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MMP14	P50281	582 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ADK	P55263	362 aa	Known RBP	13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GSC	P56915	257 aa	Predicted RBP	13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RBL2	Q08999	1139 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	KCNB1	Q14721	858 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MEA1	Q16626	185 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TRIM58	Q8NG06	486 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EDEM3	Q9BZQ6	932 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SENP3	Q9H4L4	574 aa	Predicted RBP	13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	THAP9	Q9H5L6	903 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ZCCHC17	Q9NP64	241 aa	Known RBP	13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	HPCAL4	Q9UM19	191 aa		13.23	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NUP188	Q5SRE5	1749 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NWD2	Q9ULI1	1742 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	UBN2	Q6ZU65	1347 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ERVV-2	B6SEH9	535 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GTPBP6	O43824	516 aa	Predicted RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ERLIN2	O94905	339 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NDUFA10	O95299	355 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TCP1	P17987	556 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	DNM2	P50570	870 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	VSNL1	P62760	191 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	AKAP17A	Q02040	695 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	DPYD	Q12882	1025 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	COBLL1	Q53SF7	1204 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	HSP90AB3P	Q58FF7	597 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RAD9B	Q6WBX8	426 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	DIS3L2	Q8IYB7	885 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	STK11IP	Q8N1F8	1099 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SLC35F6	Q8N357	371 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ARFGAP2	Q8N6H7	521 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	USHBP1	Q8N6Y0	703 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NFATC2IP	Q8NCF5	419 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	FBXO41	Q8TF61	875 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CAVIN3	Q969G5	261 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CCDC47	Q96A33	483 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LY9	Q9HBG7	655 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LUC7L	Q9NQ29	371 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CAPN11	Q9UMQ6	739 aa		13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	LUC7L2	Q9Y383	392 aa	Known RBP	13.22	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PNPLA7	Q6ZV29	1317 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GOLGA6C	A6NDK9	693 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PATL2	C9JE40	543 aa	Known RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	N4BP3	O15049	544 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	USO1	O60763	962 aa	Known RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GYPC	P04921	128 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PCCA	P05165	728 aa	Predicted RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CSF1R	P07333	972 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GOLGA6D	P0CG33	693 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	EPHB4	P54760	987 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PAK1	Q13153	545 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	RTN1	Q16799	776 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	TMEM67	Q5HYA8	995 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NFXL1	Q6ZNB6	911 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	MAGEC3	Q8TD91	643 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	PNKP	Q96T60	521 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	SH3GL2	Q99962	352 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	NUCKS1	Q9H1E3	243 aa	Known RBP	13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	GOLGA6A	Q9NYA3	693 aa		13.21	□□□□□ -0.29
U2AF1L4-221	ENST00000601236	BICDL2	A1A5D9	508 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	GOLGA6B	A6NDN3	693 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	SOWAHD	A6NJG2	315 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	LAD1	O00515	517 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	ZBTB22	O15209	634 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	KIAA0754	O94854	1291 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	CALR	P27797	417 aa	Known RBP	13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	LONP1	P36776	959 aa	Known RBP	13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	FMR1	Q06787	632 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	PDE4B	Q07343	736 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	ORC2	Q13416	577 aa	Predicted RBP	13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	MLEC	Q14165	292 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	SLC9C2	Q5TAH2	1124 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	TEX2	Q8IWB9	1127 aa		13.2	□□□□□ -0.3
U2AF1L4-221	ENST00000601236	CD302	Q8IX05	232 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms