RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 FKTNO75072 461 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 EVX2Q03828 476 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 ICA1Q05084 483 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 SEPT2Q15019 361 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 CASC1Q6TDU7 716 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 DSCC1Q9BVC3 393 aa14.33□□□□□ -0.12
ARHGEF1-216ENST00000598587 PARP14Q460N5 1801 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 TLR2O60603 784 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 PCP11498 1178 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 AKR1B1P15121 316 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 OSBPP22059 807 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 CHMLP26374 656 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 JAG1P78504 1218 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 MOGSQ13724 837 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 STK11IPQ8N1F8 1099 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 KANSL2Q9H9L4 492 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
ARHGEF1-216ENST00000598587 FOXP2O15409 715 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 FGAP02671 866 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 TSPY3P0CV98 308 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 TSPY8P0CW00 308 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 RASA1P20936 1047 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 KIF22Q14807 665 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 ZNF296Q8WUU4 475 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 ERO1AQ96HE7 468 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 C12orf42Q96LP6 360 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 PLIN4Q96Q06 1357 aa14.31□□□□□ -0.12
ARHGEF1-216ENST00000598587 ZNF213O14771 459 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 NT5C2P49902 561 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 SP3Q02447 781 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 ZYXQ15942 572 aaKnown RBP14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 GOPCQ9HD26 462 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 TOMM22Q9NS69 142 aa14.3□□□□□ -0.12
ARHGEF1-216ENST00000598587 TSPY2A6NKD2 308 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 PRDM1O75626 825 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 CTDSPL2Q05D32 466 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 KIAA1211Q6ZU35 1233 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 LPAR1Q92633 364 aa14.29□□□□□ -0.12
ARHGEF1-216ENST00000598587 A0A0G2JMZ2 1700 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 SGSM2O43147 1006 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 ORC4O43929 436 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 CYP2C8P10632 490 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 HOXA7P31268 230 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 GCLCP48506 637 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 COL13A1Q5TAT6 717 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 MFSD6Q6ZSS7 791 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 CTU1Q7Z7A3 348 aaKnown RBP14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 R3HDMLQ9H3Y0 253 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
ARHGEF1-216ENST00000598587 ZSWIM8A7E2V4 1837 aa14.27□□□□□ -0.12
ARHGEF1-216ENST00000598587 COL11A1P12107 1806 aaPredicted RBP14.27□□□□□ -0.12
ARHGEF1-216ENST00000598587 ADGRA2Q96PE1 1338 aa14.27□□□□□ -0.12
ARHGEF1-216ENST00000598587 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 RANBP6O60518 1105 aaKnown RBP14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 CDC45O75419 566 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 TTLL1O95922 423 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 VCAM1P19320 739 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 HAND2P61296 217 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 PKN2Q16513 984 aaKnown RBP14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 AKNAD1Q5T1N1 836 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 TNS4Q8IZW8 715 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 NEDD1Q8NHV4 660 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 STAG1Q8WVM7 1258 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 NYAP2Q9P242 653 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 CPA4Q9UI42 421 aa14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
ARHGEF1-216ENST00000598587 WDR46O15213 610 aaKnown RBP14.26□□□□□ -0.13
ARHGEF1-216ENST00000598587 GNRH1P01148 92 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms