RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 GPAA1O43292 621 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 GUCY1A2P33402 732 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 CDK8P49336 464 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 SEPT2Q15019 361 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 TMEM179Q6ZVK1 233 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 C16orf86Q6ZW13 317 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 TICAM2Q86XR7 235 aa22.88■■□□□ 1.25
LTBP4-208ENST00000593738 MYPNQ86TC9 1320 aa22.87■■□□□ 1.25
LTBP4-208ENST00000593738 SLC44A5Q8NCS7 719 aa22.87■■□□□ 1.25
LTBP4-208ENST00000593738 GTF3C2Q8WUA4 911 aaPredicted RBP22.87■■□□□ 1.25
LTBP4-208ENST00000593738 EVI5LQ96CN4 794 aa22.87■■□□□ 1.25
LTBP4-208ENST00000593738 CYP2D7A0A087X1C5 515 aa22.86■■□□□ 1.25
LTBP4-208ENST00000593738 ECM2O94769 699 aaPredicted RBP22.86■■□□□ 1.25
LTBP4-208ENST00000593738 ZMYM1Q5SVZ6 1142 aa22.86■■□□□ 1.25
LTBP4-208ENST00000593738 RAET1EQ8TD07 263 aa22.86■■□□□ 1.25
LTBP4-208ENST00000593738 ZNF333Q96JL9 665 aa22.86■■□□□ 1.25
LTBP4-208ENST00000593738 P2RX7Q99572 595 aaKnown RBP22.86■■□□□ 1.25
LTBP4-208ENST00000593738 MORF4L1Q9UBU8 362 aa22.86■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L15C9J2P7 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 PATL2C9JE40 543 aaKnown RBP22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L13C9JLJ4 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L11C9JVI0 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L18D6R9N7 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L22D6RA61 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L17D6RBQ6 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L19D6RCP7 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L20D6RJB6 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 M0R2C6 588 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 TNPO2O14787 897 aaKnown RBP22.85■■□□□ 1.25
LTBP4-208ENST00000593738 IGHDP01880 384 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 HERVK_113P62684 666 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 USP17L24Q0WX57 530 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 ACER1Q8TDN7 264 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 COA7Q96BR5 231 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 LNPKQ9C0E8 428 aa22.85■■□□□ 1.25
LTBP4-208ENST00000593738 RBBP6Q7Z6E9 1792 aaKnown RBP22.85■■□□□ 1.25
LTBP4-208ENST00000593738 NUCB1Q02818 461 aa22.84■■□□□ 1.25
LTBP4-208ENST00000593738 ZYXQ15942 572 aaKnown RBP22.84■■□□□ 1.25
LTBP4-208ENST00000593738 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
LTBP4-208ENST00000593738 CHD1LQ86WJ1 897 aa22.84■■□□□ 1.25
LTBP4-208ENST00000593738 TMEM106CQ9BVX2 250 aa22.84■■□□□ 1.25
LTBP4-208ENST00000593738 NACAP1Q9BZK3 213 aa22.84■■□□□ 1.25
LTBP4-208ENST00000593738 APPP05067 770 aa22.83■■□□□ 1.25
LTBP4-208ENST00000593738 PRKCZQ05513 592 aa22.83■■□□□ 1.25
LTBP4-208ENST00000593738 CATSPERGQ6ZRH7 1159 aa22.83■■□□□ 1.25
LTBP4-208ENST00000593738 SH2D4AQ9H788 454 aa22.83■■□□□ 1.25
LTBP4-208ENST00000593738 ARHGEF10LQ9HCE6 1279 aa22.83■■□□□ 1.25
LTBP4-208ENST00000593738 AKR1B1P15121 316 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 VCAM1P19320 739 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 GRK4P32298 578 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 TDO2P48775 406 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 GPRC5AQ8NFJ5 357 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 SEC62Q99442 399 aaKnown RBP22.82■■□□□ 1.24
LTBP4-208ENST00000593738 ZNF287Q9HBT7 754 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 HTTP42858 3142 aa22.82■■□□□ 1.24
LTBP4-208ENST00000593738 ROBO3Q96MS0 1386 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 A0A1W2PRG0 241 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 MINDY4BA8MYZ0 360 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 SMIM22K7EJ46 135 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 IRF5Q13568 498 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 IFNL3Q8IZI9 196 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 SLAIN1Q8ND83 568 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 SH3TC2Q8TF17 1288 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 KANSL2Q9H9L4 492 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 GABRQQ9UN88 632 aa22.81■■□□□ 1.24
LTBP4-208ENST00000593738 FLT3LGP49771 235 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 ICA1Q05084 483 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 LPAR1Q92633 364 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 OSBPL3Q9H4L5 887 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 MKNK2Q9HBH9 465 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 EPB41L4AQ9HCS5 686 aaPredicted RBP22.8■■□□□ 1.24
LTBP4-208ENST00000593738 RBPJLQ9UBG7 517 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 TMX2Q9Y320 296 aa22.8■■□□□ 1.24
LTBP4-208ENST00000593738 DOCK3Q8IZD9 2030 aa22.79■■□□□ 1.24
LTBP4-208ENST00000593738 LBX2Q6XYB7 198 aa22.79■■□□□ 1.24
LTBP4-208ENST00000593738 SIAH1Q8IUQ4 282 aa22.79■■□□□ 1.24
LTBP4-208ENST00000593738 RPAP3Q9H6T3 665 aaPredicted RBP22.79■■□□□ 1.24
LTBP4-208ENST00000593738 HELLSQ9NRZ9 838 aa22.79■■□□□ 1.24
LTBP4-208ENST00000593738 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
LTBP4-208ENST00000593738 POTEFA5A3E0 1075 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 ADCY3O60266 1144 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 ERVK-9P63128 1117 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 ERVK-24P63145 666 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 UBXN2AP68543 259 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 PLEKHM2Q8IWE5 1019 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 TXNRD2Q9NNW7 524 aa22.78■■□□□ 1.24
LTBP4-208ENST00000593738 SLC3A2P08195 630 aaKnown RBP22.77■■□□□ 1.24
LTBP4-208ENST00000593738 RASA1P20936 1047 aa22.77■■□□□ 1.24
LTBP4-208ENST00000593738 MAPK4P31152 587 aa22.77■■□□□ 1.24
LTBP4-208ENST00000593738 NAPBQ9H115 298 aa22.77■■□□□ 1.24
LTBP4-208ENST00000593738 VCPKMTQ9H867 229 aa22.77■■□□□ 1.24
LTBP4-208ENST00000593738 HOXC10Q9NYD6 342 aa22.77■■□□□ 1.24
LTBP4-208ENST00000593738 BIN2Q9UBW5 565 aaPredicted RBP22.77■■□□□ 1.24
LTBP4-208ENST00000593738 TRIM6-TRIM34B2RNG4 842 aa22.76■■□□□ 1.23
LTBP4-208ENST00000593738 EEF2P13639 858 aaKnown RBP22.76■■□□□ 1.23
LTBP4-208ENST00000593738 CCNA1P78396 465 aa22.76■■□□□ 1.23
LTBP4-208ENST00000593738 COG2Q14746 738 aa22.76■■□□□ 1.23
LTBP4-208ENST00000593738 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
LTBP4-208ENST00000593738 ZNF444Q8N0Y2 327 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms