RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 MBD4O95243 580 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 TFRCP02786 760 aaKnown RBP16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 VCAM1P19320 739 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 CYP2B6P20813 491 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 ERVK-24P63145 666 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
CAPNS1-213ENST00000592354 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 ATP5JP18859 108 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 GUCY1A2P33402 732 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 ADD2P35612 726 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 GABPAQ06546 454 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 SEPT2Q15019 361 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 Q3C1V9 767 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 KIAA1683Q9H0B3 1180 aa16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
CAPNS1-213ENST00000592354 PARP14Q460N5 1801 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 PRKAB2O43741 272 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 USP14P54578 494 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 HAUS7Q99871 368 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 NUDT12Q9BQG2 462 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
CAPNS1-213ENST00000592354 RLFQ13129 1914 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 CNMDO75829 334 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 MAPK4P31152 587 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 CLEC10AQ8IUN9 316 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■□□ 15.9
CAPNS1-213ENST00000592354 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
CAPNS1-213ENST00000592354 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 SMIM22K7EJ46 135 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 CCL14Q16627 93 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 PLEKHH3Q7Z736 793 aa16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-213ENST00000592354 CEP290O15078 2479 aa16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 COL11A1P12107 1806 aaPredicted RBP16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
CAPNS1-213ENST00000592354 AKR1B1P15121 316 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 RGS2P41220 211 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 MORN1Q5T089 497 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 APBA2Q99767 749 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
CAPNS1-213ENST00000592354 GREB1LQ9C091 1923 aaPredicted RBP16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 EVI5O60447 810 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 XRCC5P13010 732 aaKnown RBP16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 CCNA1P78396 465 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 KIAA1755Q5JYT7 1200 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 MAP3K21Q5TCX8 1036 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 TMEM179Q6ZVK1 233 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
CAPNS1-213ENST00000592354 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
CAPNS1-213ENST00000592354 USP17L21D6R901 530 aa16.25■□□□□ 0.19
CAPNS1-213ENST00000592354 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
CAPNS1-213ENST00000592354 ICA1Q05084 483 aa16.25■□□□□ 0.19
CAPNS1-213ENST00000592354 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms