RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 DCP1AQ9NPI6 582 aaPredicted RBP11.01□□□□□ -0.65
VPS25-205ENST00000590339 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 GAKO14976 1311 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 MYH1P12882 1939 aa11□□□□□ -0.65
VPS25-205ENST00000590339 FSD2A1L4K1 749 aa11□□□□□ -0.65
VPS25-205ENST00000590339 ORC4O43929 436 aa11□□□□□ -0.65
VPS25-205ENST00000590339 KDM4AO75164 1064 aa11□□□□□ -0.65
VPS25-205ENST00000590339 TBC1D8O95759 1140 aa11□□□□□ -0.65
VPS25-205ENST00000590339 MBD3O95983 291 aa11□□□□□ -0.65
VPS25-205ENST00000590339 TNNI2P48788 182 aa11□□□□□ -0.65
VPS25-205ENST00000590339 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
VPS25-205ENST00000590339 HDLBPQ00341 1268 aaKnown RBP11□□□□□ -0.65
VPS25-205ENST00000590339 TNFAIP1Q13829 316 aa11□□□□□ -0.65
VPS25-205ENST00000590339 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
VPS25-205ENST00000590339 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
VPS25-205ENST00000590339 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
VPS25-205ENST00000590339 CTR9Q6PD62 1173 aa11□□□□□ -0.65
VPS25-205ENST00000590339 GPT2Q8TD30 523 aa11□□□□□ -0.65
VPS25-205ENST00000590339 CLMNQ96JQ2 1002 aa11□□□□□ -0.65
VPS25-205ENST00000590339 INCENPQ9NQS7 918 aa11□□□□□ -0.65
VPS25-205ENST00000590339 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
VPS25-205ENST00000590339 TMOD2Q9NZR1 351 aa11□□□□□ -0.65
VPS25-205ENST00000590339 ARPP21Q9UBL0 812 aaPredicted RBP11□□□□□ -0.65
VPS25-205ENST00000590339 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
VPS25-205ENST00000590339 PRPF40AO75400 957 aaKnown RBP10.99□□□□□ -0.65
VPS25-205ENST00000590339 LDHCP07864 332 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 FDPSP14324 419 aaKnown RBP10.99□□□□□ -0.65
VPS25-205ENST00000590339 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
VPS25-205ENST00000590339 NT5C2P49902 561 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 SEC23AQ15436 765 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
VPS25-205ENST00000590339 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 MRIQ9BWK5 157 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 SENP2Q9HC62 589 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
VPS25-205ENST00000590339 CNPY2Q9Y2B0 182 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 SUGT1Q9Y2Z0 365 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 STK36Q9NRP7 1315 aa10.99□□□□□ -0.65
VPS25-205ENST00000590339 MYH6P13533 1939 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 CYP2D7A0A087X1C5 515 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 DHX16O60231 1041 aaKnown RBP10.98□□□□□ -0.65
VPS25-205ENST00000590339 METAP2P50579 478 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS25-205ENST00000590339 TCP10Q12799 353 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
VPS25-205ENST00000590339 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 ESR2Q92731 530 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 DDX11Q96FC9 970 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 ELP1O95163 1332 aa10.98□□□□□ -0.65
VPS25-205ENST00000590339 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 GOLGA8AA7E2F4 631 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 MINDY4BA8MYZ0 360 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 USP17L12C9JPN9 530 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 USP17L21D6R901 530 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 IFIT3O14879 490 aaKnown RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 ZBTB43O43298 467 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 TM4SF4P48230 202 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 ZNF445P59923 1031 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 DGKZQ13574 1117 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 NTRK3Q16288 839 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 CSPP1Q1MSJ5 1256 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 CDC42EP5Q6NZY7 148 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 SH3RF3Q8TEJ3 882 aaPredicted RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 GZF1Q9H116 711 aaPredicted RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 ZSCAN16Q9H4T2 348 aaPredicted RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 FAM217BQ9NTX9 383 aaPredicted RBP10.97□□□□□ -0.65
VPS25-205ENST00000590339 SAGE1Q9NXZ1 904 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
VPS25-205ENST00000590339 GREB1LQ9C091 1923 aaPredicted RBP10.96□□□□□ -0.65
VPS25-205ENST00000590339 SIPA1L1O43166 1804 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 TNKSO95271 1327 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 CCDC85CA6NKD9 419 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 GADD45BO75293 160 aaPredicted RBP10.96□□□□□ -0.65
VPS25-205ENST00000590339 CDKL5O76039 1030 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 BAG3O95817 575 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 CYP2D6P10635 497 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 CDC27P30260 824 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 BTDP43251 543 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 RHBDL3P58872 404 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 KRT85P78386 507 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 EVX2Q03828 476 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 SREBF2Q12772 1141 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 WTAPQ15007 396 aa10.96□□□□□ -0.65
VPS25-205ENST00000590339 C12orf60Q5U649 245 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms