RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ERVK-24P63145 666 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 RAB3GAP1Q15042 981 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 LCORLQ8N3X6 602 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 ACER1Q8TDN7 264 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 SOCS4Q8WXH5 440 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.05
VAT1-206ENST00000589709 DEFB118Q96PH6 123 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 LRRCC1Q9C099 1032 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.77□□□□□ -0.05
VAT1-206ENST00000589709 ATP8A2Q9NTI2 1148 aa14.77□□□□□ -0.05
VAT1-206ENST00000589709 CEP290O15078 2479 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 H0YGN5 161 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
VAT1-206ENST00000589709 GUCY1A2P33402 732 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 UBE3CQ15386 1083 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 Q3C1V9 767 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 LBX2Q6XYB7 198 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 CATSPERGQ6ZRH7 1159 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 SDR42E1Q8WUS8 393 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 DPF3Q92784 378 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 NUDT12Q9BQG2 462 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 RABGAP1Q9Y3P9 1069 aa14.76□□□□□ -0.05
VAT1-206ENST00000589709 RPTORQ8N122 1335 aa14.75□□□□□ -0.05
VAT1-206ENST00000589709 PEX10O60683 326 aa14.75□□□□□ -0.05
VAT1-206ENST00000589709 TRMT44Q8IYL2 757 aaKnown RBP14.75□□□□□ -0.05
VAT1-206ENST00000589709 USP6NLQ92738 828 aa14.75□□□□□ -0.05
VAT1-206ENST00000589709 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.75□□□□□ -0.05
VAT1-206ENST00000589709 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
VAT1-206ENST00000589709 ARMT1Q9H993 441 aa14.75□□□□□ -0.05
VAT1-206ENST00000589709 HMX1Q9NP08 348 aaPredicted RBP14.75□□□□□ -0.05
VAT1-206ENST00000589709 MBD4O95243 580 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 VCAM1P19320 739 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 CYP2B6P20813 491 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 CCNA1P78396 465 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 SEPT2Q15019 361 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 ZYXQ15942 572 aaKnown RBP14.74□□□□□ -0.05
VAT1-206ENST00000589709 MORN1Q5T089 497 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 MAP3K21Q5TCX8 1036 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 ZSCAN25Q6NSZ9 544 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 CCAR1Q8IX12 1150 aaKnown RBP14.74□□□□□ -0.05
VAT1-206ENST00000589709 ANKLE1Q8NAG6 615 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 PORCNQ9H237 461 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 DCTPP1Q9H773 170 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 ECHDC1Q9NTX5 307 aa14.74□□□□□ -0.05
VAT1-206ENST00000589709 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
VAT1-206ENST00000589709 DDX60LQ5H9U9 1706 aaKnown RBP14.74□□□□□ -0.05
VAT1-206ENST00000589709 PRKAB2O43741 272 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 CNMDO75829 334 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 CYP2D6P10635 497 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 EVX2Q03828 476 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 TMEM179Q6ZVK1 233 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 GPR142Q7Z601 462 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 PLEKHH3Q7Z736 793 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 TRIB2Q92519 343 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 CCDC17Q96LX7 622 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 NR2E3Q9Y5X4 410 aa14.73□□□□□ -0.05
VAT1-206ENST00000589709 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
VAT1-206ENST00000589709 MPHOSPH10O00566 681 aaKnown RBP14.72□□□□□ -0.05
VAT1-206ENST00000589709 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
VAT1-206ENST00000589709 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
VAT1-206ENST00000589709 RGS2P41220 211 aa14.72□□□□□ -0.05
VAT1-206ENST00000589709 TRIM32Q13049 653 aa14.72□□□□□ -0.05
VAT1-206ENST00000589709 SLFNL1Q499Z3 407 aa14.72□□□□□ -0.05
VAT1-206ENST00000589709 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
VAT1-206ENST00000589709 RPAP3Q9H6T3 665 aaPredicted RBP14.72□□□□□ -0.05
VAT1-206ENST00000589709 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 USP17L21D6R901 530 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 COG2Q14746 738 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 NECAB2Q7Z6G3 386 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 SIAH1Q8IUQ4 282 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 DYNLL2Q96FJ2 89 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.05
VAT1-206ENST00000589709 HOXC10Q9NYD6 342 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 OGDHLQ9ULD0 1010 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.05
VAT1-206ENST00000589709 PLXNB2O15031 1838 aa14.71□□□□□ -0.06
VAT1-206ENST00000589709 SLC15A5A6NIM6 579 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
VAT1-206ENST00000589709 CHGBP05060 677 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 PRKAR2AP13861 404 aaKnown RBP14.7□□□□□ -0.06
VAT1-206ENST00000589709 ZKSCAN1P17029 563 aaPredicted RBP14.7□□□□□ -0.06
VAT1-206ENST00000589709 MAP2K5Q13163 448 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 LPAR1Q92633 364 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 APBA2Q99767 749 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 PUS7LQ9H0K6 701 aaKnown RBP14.7□□□□□ -0.06
VAT1-206ENST00000589709 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 TMX2Q9Y320 296 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 SLC4A4Q9Y6R1 1079 aa14.7□□□□□ -0.06
VAT1-206ENST00000589709 HOXC6P09630 235 aa14.69□□□□□ -0.06
VAT1-206ENST00000589709 AKR1B1P15121 316 aa14.69□□□□□ -0.06
VAT1-206ENST00000589709 PTPREP23469 700 aa14.69□□□□□ -0.06
VAT1-206ENST00000589709 CDK8P49336 464 aa14.69□□□□□ -0.06
VAT1-206ENST00000589709 FXR1P51114 621 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms