RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 HMGCRP04035 888 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 ADD2P35612 726 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 ERVK-9P63128 1117 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 ERVK-24P63145 666 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
DDX39A-210ENST00000589675 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 HTATIP2Q9BUP3 242 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
DDX39A-210ENST00000589675 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
DDX39A-210ENST00000589675 GUCY1A2P33402 732 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 RAB3GAP1Q15042 981 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
DDX39A-210ENST00000589675 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 SOCS4Q8WXH5 440 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 USP6NLQ92738 828 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 EDC3Q96F86 508 aaKnown RBP13.47□□□□□ -0.25
DDX39A-210ENST00000589675 FEZ1Q99689 392 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 NUDT12Q9BQG2 462 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 SWAP70Q9UH65 585 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
DDX39A-210ENST00000589675 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 H0YGN5 161 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 FARP2O94887 1054 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-210ENST00000589675 TFRCP02786 760 aaKnown RBP13.46□□□□□ -0.25
DDX39A-210ENST00000589675 Q3C1V9 767 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 ACER1Q8TDN7 264 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 DEFB118Q96PH6 123 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.46□□□□□ -0.257e-7■■■□□ 16.6
DDX39A-210ENST00000589675 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
DDX39A-210ENST00000589675 VCAM1P19320 739 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 CCNA1P78396 465 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 SEPT2Q15019 361 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 MORN1Q5T089 497 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 MAP3K21Q5TCX8 1036 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 TMEM179Q6ZVK1 233 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 DPF3Q92784 378 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-210ENST00000589675 RLFQ13129 1914 aa13.45□□□□□ -0.26
DDX39A-210ENST00000589675 CNMDO75829 334 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
DDX39A-210ENST00000589675 MBD4O95243 580 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
DDX39A-210ENST00000589675 C12orf60Q5U649 245 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 GPR142Q7Z601 462 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 CCAR1Q8IX12 1150 aaKnown RBP13.44□□□□□ -0.26
DDX39A-210ENST00000589675 TRIB2Q92519 343 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 PAGR1Q9BTK6 254 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 PORCNQ9H237 461 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
DDX39A-210ENST00000589675 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 PRKAB2O43741 272 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 PEX10O60683 326 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 CYP2D6P10635 497 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 CYP2B6P20813 491 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 RGS2P41220 211 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 EVX2Q03828 476 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-210ENST00000589675 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-210ENST00000589675 NR2E3Q9Y5X4 410 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
DDX39A-210ENST00000589675 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-210ENST00000589675 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
DDX39A-210ENST00000589675 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-210ENST00000589675 TRIM32Q13049 653 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 COG2Q14746 738 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 SLFNL1Q499Z3 407 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 NECAB2Q7Z6G3 386 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 LPAR1Q92633 364 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 APBA2Q99767 749 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 OGDHLQ9ULD0 1010 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 TMX2Q9Y320 296 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
DDX39A-210ENST00000589675 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 SLC15A5A6NIM6 579 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 USP17L21D6R901 530 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 HOXC6P09630 235 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
DDX39A-210ENST00000589675 ZKSCAN1P17029 563 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-210ENST00000589675 PTPREP23469 700 aa13.41□□□□□ -0.26
DDX39A-210ENST00000589675 CDK8P49336 464 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms