RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NOVP48745 357 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-205ENST00000588745 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-205ENST00000588745 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 CTCFLQ8NI51 663 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-205ENST00000588745 DPF2Q92785 391 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 C8orf76Q96K31 380 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 TCP10L2B9ZVM9 353 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 WNT10BO00744 389 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 FOSBP53539 338 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
SMAD4-205ENST00000588745 RESTQ13127 1097 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 TMTC3Q6ZXV5 915 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 NBPF11Q86T75 865 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.29
SMAD4-205ENST00000588745 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
SMAD4-205ENST00000588745 TRIM22Q8IYM9 498 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 FAM151AQ8WW52 585 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 WASF1Q92558 559 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 CEP95Q96GE4 821 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 TMEM47Q9BQJ4 181 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMAD4-205ENST00000588745 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
SMAD4-205ENST00000588745 VEZTQ9HBM0 779 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 GJA3Q9Y6H8 435 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 MYH6P13533 1939 aa13.27□□□□□ -0.29
SMAD4-205ENST00000588745 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 DEXIO95424 95 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 KIF5BP33176 963 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 GRM4Q14833 912 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
SMAD4-205ENST00000588745 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
SMAD4-205ENST00000588745 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 CCDC17Q96LX7 622 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 ALG1Q9BT22 464 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 ZSCAN16Q9H4T2 348 aaPredicted RBP13.26□□□□□ -0.29
SMAD4-205ENST00000588745 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
SMAD4-205ENST00000588745 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 SLURP2P0DP57 97 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
SMAD4-205ENST00000588745 FUT2Q10981 343 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 CMTR1Q8N1G2 835 aaKnown RBP13.25□□□□□ -0.29
SMAD4-205ENST00000588745 FBXO18Q8NFZ0 1043 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 MTMR4Q9NYA4 1195 aa13.25□□□□□ -0.29
SMAD4-205ENST00000588745 HERC5Q9UII4 1024 aaKnown RBP13.25□□□□□ -0.29
SMAD4-205ENST00000588745 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
SMAD4-205ENST00000588745 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.293e-7■■□□□ 12.8
SMAD4-205ENST00000588745 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
SMAD4-205ENST00000588745 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 GPC2Q8N158 579 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
SMAD4-205ENST00000588745 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 TCHHQ07283 1943 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
SMAD4-205ENST00000588745 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
SMAD4-205ENST00000588745 TRAK2O60296 914 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 TTLL1O95922 423 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 EGFRP00533 1210 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 GUCY1A2P33402 732 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 TNNI2P48788 182 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 KRT85P78386 507 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
SMAD4-205ENST00000588745 TNFAIP1Q13829 316 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 TRIM29Q14134 588 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
SMAD4-205ENST00000588745 KRT40Q6A162 431 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 CLEC10AQ8IUN9 316 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
SMAD4-205ENST00000588745 FIBPO43427 364 aa13.22□□□□□ -0.29
SMAD4-205ENST00000588745 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 GNAQP50148 359 aa13.22□□□□□ -0.29
SMAD4-205ENST00000588745 KIF23Q02241 960 aaPredicted RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 TBC1D10BQ4KMP7 808 aaPredicted RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
SMAD4-205ENST00000588745 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
SMAD4-205ENST00000588745 TMEM179Q6ZVK1 233 aa13.22□□□□□ -0.29
SMAD4-205ENST00000588745 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
SMAD4-205ENST00000588745 SRBD1Q8N5C6 995 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms