RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
CCDC43-203ENST00000588210 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CCDC43-203ENST00000588210 PFKFB2O60825 505 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 HTRA3P83110 453 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 TTLL12Q14166 644 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 DSCC1Q9BVC3 393 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 PUS7LQ9H0K6 701 aaKnown RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 TFIP11Q9UBB9 837 aaKnown RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 SSC5DA1L4H1 1573 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 COL2A1P02458 1487 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 USP5P45974 858 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 SCRN1Q12765 414 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 CAMK4Q16566 473 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-203ENST00000588210 LCORLQ8N3X6 602 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 KIAA1524Q8TCG1 905 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 FAM13BQ9NYF5 915 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 FLT1P17948 1338 aa16.98■□□□□ 0.31
CCDC43-203ENST00000588210 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 ATRNL1Q5VV63 1379 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 MBD4O95243 580 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 HUNKP57058 714 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 DEFB115Q30KQ5 88 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 DCAF15Q66K64 600 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 CSRNP1Q96S65 589 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
CCDC43-203ENST00000588210 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 DDTLA6NHG4 134 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-203ENST00000588210 H3BQV1 296 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC43-203ENST00000588210 PRKG1Q13976 671 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
CCDC43-203ENST00000588210 SH3BP5LQ7L8J4 393 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 CBX8Q9HC52 389 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
CCDC43-203ENST00000588210 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
CCDC43-203ENST00000588210 UNCXA6NJT0 531 aa16.96■□□□□ 0.31
CCDC43-203ENST00000588210 USP2O75604 605 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-203ENST00000588210 IREB2P48200 963 aaKnown RBP16.96■□□□□ 0.31
CCDC43-203ENST00000588210 ZMYM1Q5SVZ6 1142 aa16.96■□□□□ 0.31
CCDC43-203ENST00000588210 CKAP2LQ8IYA6 745 aa16.96■□□□□ 0.31
CCDC43-203ENST00000588210 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-203ENST00000588210 NSUN7Q8NE18 718 aaKnown RBP16.96■□□□□ 0.31
CCDC43-203ENST00000588210 BICD2Q8TD16 824 aa16.96■□□□□ 0.31
CCDC43-203ENST00000588210 NR1I2O75469 434 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 UBE2Q2LH0YL09 131 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 CAVIN2O95810 425 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 STRBPQ96SI9 672 aaKnown RBP16.95■□□□□ 0.3
CCDC43-203ENST00000588210 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 MKRN1Q9UHC7 482 aaKnown RBP16.95■□□□□ 0.3
CCDC43-203ENST00000588210 PYCARDQ9ULZ3 195 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 FZD1Q9UP38 647 aa16.95■□□□□ 0.3
CCDC43-203ENST00000588210 EXOSC10Q01780 885 aaKnown RBP16.94■□□□□ 0.3
CCDC43-203ENST00000588210 MAP3K10Q02779 954 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 LDLRAD1Q5T700 205 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 MIGA2Q7L4E1 593 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-203ENST00000588210 SDR42E1Q8WUS8 393 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 ZNF341Q9BYN7 854 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
CCDC43-203ENST00000588210 GPAA1O43292 621 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 TBC1D12O60347 775 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 GNAT2P19087 354 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 FGD1P98174 961 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 SPC24Q8NBT2 197 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 KLRG1Q96E93 195 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-203ENST00000588210 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 M0R2C6 588 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
CCDC43-203ENST00000588210 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 PLA2G4DQ86XP0 818 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 DNAJC5GQ8N7S2 189 aa16.93■□□□□ 0.3
CCDC43-203ENST00000588210 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
CCDC43-203ENST00000588210 PRKAB2O43741 272 aa16.92■□□□□ 0.3
CCDC43-203ENST00000588210 CTDNEP1O95476 244 aa16.92■□□□□ 0.3
CCDC43-203ENST00000588210 HLA-DOAP06340 250 aa16.92■□□□□ 0.3
CCDC43-203ENST00000588210 ECE1P42892 770 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms