RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 TRMT44Q8IYL2 757 aaKnown RBP17.01■□□□□ 0.31
HDAC5-203ENST00000586339 NUDT12Q9BQG2 462 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■■■■□ 22.2
HDAC5-203ENST00000586339 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-203ENST00000586339 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 RBPJLQ9UBG7 517 aa17.01■□□□□ 0.31
HDAC5-203ENST00000586339 PARP14Q460N5 1801 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 RLFQ13129 1914 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 TFRCP02786 760 aaKnown RBP17■□□□□ 0.31
HDAC5-203ENST00000586339 VCAM1P19320 739 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 ADD2P35612 726 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 LBX2Q6XYB7 198 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 ANKLE1Q8NAG6 615 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 HAUS7Q99871 368 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 HMX1Q9NP08 348 aaPredicted RBP17■□□□□ 0.31
HDAC5-203ENST00000586339 RABGAP1Q9Y3P9 1069 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 NR2E3Q9Y5X4 410 aa17■□□□□ 0.31
HDAC5-203ENST00000586339 CCNA1P78396 465 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
HDAC5-203ENST00000586339 CATSPERGQ6ZRH7 1159 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
HDAC5-203ENST00000586339 LCORLQ8N3X6 602 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 SDR42E1Q8WUS8 393 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 TRIB2Q92519 343 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 PAGR1Q9BTK6 254 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 SWAP70Q9UH65 585 aa16.99■□□□□ 0.31
HDAC5-203ENST00000586339 COLQQ9Y215 455 aaPredicted RBP16.99■□□□□ 0.31
HDAC5-203ENST00000586339 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 CYP2B6P20813 491 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 MAP3K21Q5TCX8 1036 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 GPR142Q7Z601 462 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 ACER1Q8TDN7 264 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 USP6NLQ92738 828 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
HDAC5-203ENST00000586339 ATP8A2Q9NTI2 1148 aa16.98■□□□□ 0.31
HDAC5-203ENST00000586339 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
HDAC5-203ENST00000586339 RGS2P41220 211 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
HDAC5-203ENST00000586339 SEPT2Q15019 361 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 Q3C1V9 767 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 MORN1Q5T089 497 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 TMEM179Q6ZVK1 233 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 NECAB2Q7Z6G3 386 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 PLEKHH3Q7Z736 793 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 APBA2Q99767 749 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 PORCNQ9H237 461 aa16.97■□□□□ 0.31
HDAC5-203ENST00000586339 PEX10O60683 326 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 CNMDO75829 334 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
HDAC5-203ENST00000586339 MBD4O95243 580 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 POTEEQ6S8J3 1075 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.31
HDAC5-203ENST00000586339 ARMT1Q9H993 441 aa16.96■□□□□ 0.31
HDAC5-203ENST00000586339 GREB1LQ9C091 1923 aaPredicted RBP16.96■□□□□ 0.3
HDAC5-203ENST00000586339 SPDYE16A6NNV3 312 aaPredicted RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 MPHOSPH10O00566 681 aaKnown RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 TRIM32Q13049 653 aa16.95■□□□□ 0.3
HDAC5-203ENST00000586339 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
HDAC5-203ENST00000586339 DDRGK1Q96HY6 314 aa16.95■□□□□ 0.3
HDAC5-203ENST00000586339 PAWRQ96IZ0 340 aaKnown RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
HDAC5-203ENST00000586339 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 OGDHLQ9ULD0 1010 aa16.95■□□□□ 0.3
HDAC5-203ENST00000586339 ZNFX1Q9P2E3 1918 aaKnown RBP16.95■□□□□ 0.3
HDAC5-203ENST00000586339 COL11A1P12107 1806 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-203ENST00000586339 EVI5O60447 810 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 MAP2K5Q13163 448 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 LPAR1Q92633 364 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 CCDC17Q96LX7 622 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 SZT2Q5T011 3432 aa16.94■□□□□ 0.3
HDAC5-203ENST00000586339 A0A1W2PRG0 241 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 SLC15A5A6NIM6 579 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 CYP2D6P10635 497 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 EVX2Q03828 476 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 NBPF3Q9H094 633 aa16.93■□□□□ 0.3
HDAC5-203ENST00000586339 PRO3102Q9H379 93 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms