RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 NEDD4P46934 1319 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 TMEM88BA6NKF7 163 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 FAM196BA6NMK8 535 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 STOX1Q6ZVD7 989 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
CCDC47-203ENST00000580986 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 CABP5Q9NP86 173 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 ANGEL1Q9UNK9 670 aaKnown RBP12.28□□□□□ -0.44
CCDC47-203ENST00000580986 CSADQ9Y600 493 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 TACC3Q9Y6A5 838 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 TAF6LQ9Y6J9 622 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
CCDC47-203ENST00000580986 TSPY2A6NKD2 308 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 TSPY3P0CV98 308 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 TSPY8P0CW00 308 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 INPP5BP32019 993 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 APLP1P51693 650 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 VGLL4Q14135 290 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 RRP1BQ14684 758 aaKnown RBP12.27□□□□□ -0.45
CCDC47-203ENST00000580986 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 TTC14Q96N46 770 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCDC47-203ENST00000580986 KANSL2Q9H9L4 492 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 SNCAIPQ9Y6H5 919 aa12.27□□□□□ -0.45
CCDC47-203ENST00000580986 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 B4E1Z4 1266 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 RANBP6O60518 1105 aaKnown RBP12.26□□□□□ -0.45
CCDC47-203ENST00000580986 KDM4AO75164 1064 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 PRDM1O75626 825 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 GH2P01242 217 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 SLURP2P0DP57 97 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 AKR1B1P15121 316 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 MCM5P33992 734 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 TFAP4Q01664 338 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 PPATQ06203 517 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC47-203ENST00000580986 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
CCDC47-203ENST00000580986 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
CCDC47-203ENST00000580986 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 ERO1BQ86YB8 467 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 ANKS1AQ92625 1134 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 ZNF408Q9H9D4 720 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 PICK1Q9NRD5 415 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 NYAP2Q9P242 653 aa12.26□□□□□ -0.45
CCDC47-203ENST00000580986 USP17L5A8MUK1 530 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 ST18O60284 1047 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 ZBTB48P10074 688 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-203ENST00000580986 PTPRAP18433 802 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 GUCY1A2P33402 732 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 EXOSC10Q01780 885 aaKnown RBP12.25□□□□□ -0.45
CCDC47-203ENST00000580986 ADCK5Q3MIX3 580 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
CCDC47-203ENST00000580986 ZKSCAN4Q969J2 545 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-203ENST00000580986 MKL1Q969V6 931 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-203ENST00000580986 SH2D4AQ9H788 454 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 AS3MTQ9HBK9 375 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 TOMM22Q9NS69 142 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 MTMR4Q9NYA4 1195 aa12.25□□□□□ -0.45
CCDC47-203ENST00000580986 RASSF10A6NK89 507 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 GDF11O95390 407 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 TTLL1O95922 423 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 PTPRFP10586 1907 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 RPS6KB1P23443 525 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 LIFRP42702 1097 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 HUNKP57058 714 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 JAG1P78504 1218 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 ICA1Q05084 483 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 PPIL2Q13356 520 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 RRP12Q5JTH9 1297 aaKnown RBP12.24□□□□□ -0.45
CCDC47-203ENST00000580986 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 CEP95Q96GE4 821 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
CCDC47-203ENST00000580986 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
CCDC47-203ENST00000580986 KIF2CQ99661 725 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 INCENPQ9NQS7 918 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
CCDC47-203ENST00000580986 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 TNKSO95271 1327 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms