RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 XPO4Q9C0E2 1151 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 QTRT2Q9H974 415 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 NGRNQ9NPE2 291 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 CEP72Q9P209 647 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 FAM8A1Q9UBU6 413 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 TBK1Q9UHD2 729 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 RTCAO00442 366 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 AHCYL1O43865 530 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 GRIA2P42262 883 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 MLLT1Q03111 559 aaPredicted RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 NBPF1Q3BBV0 1214 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 FAM102BQ5T8I3 360 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 RASGRP2Q7LDG7 609 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 MSL3Q8N5Y2 521 aaKnown RBP6.09□□□□□ -1.43
BRIP1-202ENST00000577598 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 TSPAN18Q96SJ8 248 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 ITM2CQ9NQX7 267 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 DIAPH3Q9NSV4 1193 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 STAP2Q9UGK3 403 aa6.09□□□□□ -1.43
BRIP1-202ENST00000577598 P4HA2O15460 535 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CHGBP05060 677 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 VDRP11473 427 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CPEP16870 476 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 GUCY2CP25092 1073 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 NPTX2P47972 431 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 GNPTABQ3T906 1256 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 ERFEQ4G0M1 354 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 PIK3R6Q5UE93 754 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 RNF20Q5VTR2 975 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CHD1LQ86WJ1 897 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 THAP3Q8WTV1 239 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 PAWRQ96IZ0 340 aaKnown RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CFAP53Q96M91 514 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 JAKMIP1Q96N16 626 aaKnown RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 ZMYM5Q9UJ78 669 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 INVSQ9Y283 1065 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 PSEN2P49810 448 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 ATN1P54259 1190 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 IRX3P78415 501 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 UAP1L1Q3KQV9 507 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 TTC39AQ5SRH9 613 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 NYAP1Q6ZVC0 841 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 SH3RF1Q7Z6J0 888 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 RAB44Q7Z6P3 723 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 A8MV72 311 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 RASA4O43374 803 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 IGHDP01880 384 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 APOA4P06727 396 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 HADHAP40939 763 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CCNG2Q16589 344 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 FKBP15Q5T1M5 1219 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 ENOSF1Q7L5Y1 443 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 SH2D3CQ8N5H7 860 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 BTN2A2Q8WVV5 523 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CHMP4CQ96CF2 233 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 SEC16BQ96JE7 1060 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 C2orf49Q9BVC5 232 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 ALG13Q9NP73 1137 aaKnown RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 TMEM229AB2RXF0 380 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 KCNJ6P48051 423 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CACNB2Q08289 660 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 NBPF14Q5TI25 921 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 C16orf87Q6PH81 154 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 UBE2Q1Q7Z7E8 422 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 KCT2Q8NC54 265 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 FAM156AQ8NDB6 213 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 PCDHGB5Q9Y5G0 923 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 TNPO3Q9Y5L0 923 aaKnown RBP6.08□□□□□ -1.44
BRIP1-202ENST00000577598 CSADQ9Y600 493 aa6.08□□□□□ -1.44
BRIP1-202ENST00000577598 TLL1O43897 1013 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 PAGE1O75459 146 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 TPM2P07951 284 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 PTPN14Q15678 1187 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 SEPT7Q16181 437 aaKnown RBP6.07□□□□□ -1.44
BRIP1-202ENST00000577598 RBM20Q5T481 1227 aaKnown RBP6.07□□□□□ -1.44
BRIP1-202ENST00000577598 BRAPQ7Z569 592 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 C1orf216Q8TAB5 229 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 ACSBG1Q96GR2 724 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 ACAD9Q9H845 621 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 STARD7Q9NQZ5 370 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 BLOC1S4Q9NUP1 217 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 AKAP7Q9P0M2 348 aaPredicted RBP6.07□□□□□ -1.44
BRIP1-202ENST00000577598 MEN1O00255 615 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 CES1P23141 567 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 CTNNA1P35221 906 aaKnown RBP6.07□□□□□ -1.44
BRIP1-202ENST00000577598 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 EPM2AIP1Q7L775 607 aaPredicted RBP6.07□□□□□ -1.44
BRIP1-202ENST00000577598 NBPF11Q86T75 865 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 TTC6Q86TZ1 520 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 ESX1Q8N693 406 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 ZBTB34Q8NCN2 500 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 XAGE3Q8WTP9 111 aa6.07□□□□□ -1.44
BRIP1-202ENST00000577598 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms