RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 C12orf42Q96LP6 360 aa15.27■□□□□ 0.03
SSH2-205ENST00000577483 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.03
SSH2-205ENST00000577483 FEZ1Q99689 392 aa15.27■□□□□ 0.03
SSH2-205ENST00000577483 TXNRD2Q9NNW7 524 aa15.27■□□□□ 0.03
SSH2-205ENST00000577483 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.03
SSH2-205ENST00000577483 FLT3LGP49771 235 aa15.26■□□□□ 0.03
SSH2-205ENST00000577483 HERVK_113P62684 666 aa15.26■□□□□ 0.03
SSH2-205ENST00000577483 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
SSH2-205ENST00000577483 OSBP2Q969R2 916 aa15.26■□□□□ 0.03
SSH2-205ENST00000577483 CABP5Q9NP86 173 aa15.26■□□□□ 0.03
SSH2-205ENST00000577483 A0A1W2PRG0 241 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 USP17L21D6R901 530 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 MX1P20591 662 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
SSH2-205ENST00000577483 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 APPBP2Q92624 585 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
SSH2-205ENST00000577483 KIAA1683Q9H0B3 1180 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 MORF4L1Q9UBU8 362 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 ZNFX1Q9P2E3 1918 aaKnown RBP15.25■□□□□ 0.03
SSH2-205ENST00000577483 M0R2C6 588 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
SSH2-205ENST00000577483 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
SSH2-205ENST00000577483 AKR1B1P15121 316 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 VCAM1P19320 739 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 TMEM106CQ9BVX2 250 aa15.25■□□□□ 0.03
SSH2-205ENST00000577483 ALPK3Q96L96 1907 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 GSG1L2A8MUP6 293 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 GLRX3O76003 335 aaKnown RBP15.24■□□□□ 0.03
SSH2-205ENST00000577483 ELNP15502 786 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 ANKRD45Q5TZF3 282 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
SSH2-205ENST00000577483 ERC2O15083 957 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 GPAA1O43292 621 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 ADCY3O60266 1144 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 CDK8P49336 464 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 USP14P54578 494 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 IRF5Q13568 498 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 TMEM179Q6ZVK1 233 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 COA7Q96BR5 231 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 SHISA4Q96DD7 197 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 SEC62Q99442 399 aaKnown RBP15.23■□□□□ 0.03
SSH2-205ENST00000577483 EPB41L4AQ9HCS5 686 aaPredicted RBP15.23■□□□□ 0.03
SSH2-205ENST00000577483 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
SSH2-205ENST00000577483 ZNF236Q9UL36 1845 aa15.23■□□□□ 0.03
SSH2-205ENST00000577483 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
SSH2-205ENST00000577483 Q3C1V9 767 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 KIAA1755Q5JYT7 1200 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
SSH2-205ENST00000577483 USP17L15C9J2P7 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L13C9JLJ4 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L11C9JVI0 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L18D6R9N7 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L22D6RA61 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L17D6RBQ6 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L19D6RCP7 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L20D6RJB6 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 CNMDO75829 334 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 CCL5P13501 91 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 ERVK-9P63128 1117 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 ERVK-24P63145 666 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 USP17L24Q0WX57 530 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 CATSPERGQ6ZRH7 1159 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 PAGR1Q9BTK6 254 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 FSD1Q9BTV5 496 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
SSH2-205ENST00000577483 GJD2Q9UKL4 321 aa15.21■□□□□ 0.03
SSH2-205ENST00000577483 INHAP05111 366 aa15.21■□□□□ 0.02
SSH2-205ENST00000577483 SBK1Q52WX2 424 aa15.21■□□□□ 0.02
SSH2-205ENST00000577483 PORCNQ9H237 461 aa15.21■□□□□ 0.02
SSH2-205ENST00000577483 BIN2Q9UBW5 565 aaPredicted RBP15.21■□□□□ 0.02
SSH2-205ENST00000577483 LAMA4Q16363 1823 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
SSH2-205ENST00000577483 UBXN2AP68543 259 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 ICA1Q05084 483 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 GIMAP6Q6P9H5 292 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 STK11IPQ8N1F8 1099 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 UNC93B1Q9H1C4 597 aa15.2■□□□□ 0.02
SSH2-205ENST00000577483 PDE1AP54750 535 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 AAMPQ13685 434 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 ZMYM1Q5SVZ6 1142 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 GTF3C2Q8WUA4 911 aaPredicted RBP15.19■□□□□ 0.02
SSH2-205ENST00000577483 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
SSH2-205ENST00000577483 RNF208Q9H0X6 261 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms