RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PAGR1Q9BTK6 254 aa14.34□□□□□ -0.11
LITAF-219ENST00000576334 UNC93B1Q9H1C4 597 aa14.34□□□□□ -0.11
LITAF-219ENST00000576334 RBPJLQ9UBG7 517 aa14.34□□□□□ -0.11
LITAF-219ENST00000576334 CCL5P13501 91 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 AKR1B1P15121 316 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 GCLCP48506 637 aaPredicted RBP14.33□□□□□ -0.12
LITAF-219ENST00000576334 PABPC4Q13310 644 aaKnown RBP eCLIP14.33□□□□□ -0.12
LITAF-219ENST00000576334 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
LITAF-219ENST00000576334 GINM1Q9NU53 330 aa14.33□□□□□ -0.12
LITAF-219ENST00000576334 M0R2C6 588 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 CNMDO75829 334 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 INHAP05111 366 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 VCAM1P19320 739 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 TRIM32Q13049 653 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
LITAF-219ENST00000576334 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 PORCNQ9H237 461 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 CABP5Q9NP86 173 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 MORF4L1Q9UBU8 362 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 GJD2Q9UKL4 321 aa14.32□□□□□ -0.12
LITAF-219ENST00000576334 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 CDK8P49336 464 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 COA7Q96BR5 231 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 GPATCH3Q96I76 525 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 C12orf42Q96LP6 360 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
LITAF-219ENST00000576334 RNF113AO15541 343 aaKnown RBP14.3□□□□□ -0.12
LITAF-219ENST00000576334 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 ERVK-24P63145 666 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 GPRC5AQ8NFJ5 357 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
LITAF-219ENST00000576334 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
LITAF-219ENST00000576334 SALL3Q9BXA9 1300 aa14.3□□□□□ -0.12
LITAF-219ENST00000576334 USP17L15C9J2P7 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L13C9JLJ4 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L11C9JVI0 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L18D6R9N7 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L22D6RA61 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L17D6RBQ6 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L19D6RCP7 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L20D6RJB6 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 GPAA1O43292 621 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 MX1P20591 662 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 CYP2B6P20813 491 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 USP17L24Q0WX57 530 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 IRF5Q13568 498 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
LITAF-219ENST00000576334 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 SPICE1Q8N0Z3 855 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 APPBP2Q92624 585 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 BTBD7Q9P203 1132 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 RLFQ13129 1914 aa14.29□□□□□ -0.12
LITAF-219ENST00000576334 MINDY4BA8MYZ0 360 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 USP14P54578 494 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 UBXN2AP68543 259 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 PXYLP1Q8TE99 480 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 TRIB2Q92519 343 aa14.28□□□□□ -0.12
LITAF-219ENST00000576334 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.28□□□□□ -0.12
LITAF-219ENST00000576334 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
LITAF-219ENST00000576334 GJB1P08034 283 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 GJA8P48165 433 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 ATP2B2Q01814 1243 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 CCL14Q16627 93 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
LITAF-219ENST00000576334 U2AF1L4Q8WU68 220 aaKnown RBP14.27□□□□□ -0.13
LITAF-219ENST00000576334 DEFB118Q96PH6 123 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 FSD1Q9BTV5 496 aa14.27□□□□□ -0.13
LITAF-219ENST00000576334 PRDM1O75626 825 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 GLRX3O76003 335 aaKnown RBP14.26□□□□□ -0.13
LITAF-219ENST00000576334 IGHDP01880 384 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 EEF2P13639 858 aaKnown RBP14.26□□□□□ -0.13
LITAF-219ENST00000576334 RASA1P20936 1047 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 ICA1Q05084 483 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 HDAC1Q13547 482 aaPredicted RBP14.26□□□□□ -0.13
LITAF-219ENST00000576334 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 GPR142Q7Z601 462 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
LITAF-219ENST00000576334 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
LITAF-219ENST00000576334 PARP14Q460N5 1801 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 ERC2O15083 957 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 FOXP2O15409 715 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 SGPL1O95470 568 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms