RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 CDKN1CP49918 316 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 KCT2Q8NC54 265 aa11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 LRP2BPQ9P2M1 347 aa11.16□□□□□ -0.62
CALCOCO2-226ENST00000575461 M0R082 166 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 GBP1P32455 592 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 CD68P34810 354 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 NFKB2Q00653 900 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 EXOSC6Q5RKV6 272 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 HEATR6Q6AI08 1181 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 DDX42Q86XP3 938 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 GALNT11Q8NCW6 608 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 RNF214Q8ND24 703 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 ZNF417Q8TAU3 575 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 SUSD2Q9UGT4 822 aa11.15□□□□□ -0.62
CALCOCO2-226ENST00000575461 DNAJC25-GNG10A0A024R161 153 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 CLEC3AO75596 197 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 RAPGEF3O95398 923 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 RNF180Q86T96 592 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 HAUS7Q99871 368 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 CRIM1Q9NZV1 1036 aa11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO2-226ENST00000575461 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 TMPRSS2O15393 492 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 UBOX5O94941 541 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 TP53P04637 393 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 EPHX1P07099 455 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 FGFR1P11362 822 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 SUMO1P63165 101 aaKnown RBP11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 MAP7Q14244 749 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
CALCOCO2-226ENST00000575461 DDX3YO15523 660 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 ADAM11O75078 769 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 DLGAP3O95886 979 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 CAP2P40123 477 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 PPP2R2AP63151 447 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 BRDTQ58F21 947 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 KLHL25Q9H0H3 589 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
CALCOCO2-226ENST00000575461 CPEP16870 476 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 EVA1CP58658 441 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 DTWD1Q8N5C7 304 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 LRRN4CLQ8ND94 238 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 FAM126AQ9BYI3 521 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 TCEAL9Q9UHQ7 104 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
CALCOCO2-226ENST00000575461 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 ITGAVP06756 1048 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 NTF4P34130 210 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 CHSY3Q70JA7 882 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 ZNF227Q86WZ6 799 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 NPAS3Q8IXF0 933 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 GEMIN8Q9NWZ8 242 aaKnown RBP11.1□□□□□ -0.63
CALCOCO2-226ENST00000575461 C9IYK1 514 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 SRSF11Q05519 484 aaKnown RBP11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 YOD1Q5VVQ6 348 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 PPM1KQ8N3J5 372 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 PPP1R14AQ96A00 147 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 FBRSQ9HAH7 460 aa11.09□□□□□ -0.63
CALCOCO2-226ENST00000575461 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 PPM1BO75688 479 aa11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 PABPC1P11940 636 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 AHI1Q8N157 1196 aa11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 AFAP1L2Q8N4X5 818 aa11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 UBR7Q8N806 425 aa11.08□□□□□ -0.64
CALCOCO2-226ENST00000575461 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 2606 ms