RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 TRIM14Q14142 442 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 DIS3L2Q8IYB7 885 aaKnown RBP18.99■□□□□ 0.63
LITAF-209ENST00000571688 ZNF496Q96IT1 587 aaPredicted RBP18.99■□□□□ 0.63
LITAF-209ENST00000571688 SELENOOQ9BVL4 669 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 SLC26A6Q9BXS9 759 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 CXorf56Q9H5V9 222 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 HDAC6Q9UBN7 1215 aa18.99■□□□□ 0.63
LITAF-209ENST00000571688 TJP1Q07157 1748 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 PPP1R3GB7ZBB8 358 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 CIAO1O76071 339 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 SSRP1Q08945 709 aaKnown RBP18.98■□□□□ 0.63
LITAF-209ENST00000571688 PAPD7Q5XG87 772 aaKnown RBP18.98■□□□□ 0.63
LITAF-209ENST00000571688 SH3RF1Q7Z6J0 888 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 TMEM87BQ96K49 555 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 TRIM10Q9UDY6 481 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 LIMA1Q9UHB6 759 aaKnown RBP18.98■□□□□ 0.63
LITAF-209ENST00000571688 GUCA1BQ9UMX6 200 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 PHF8Q9UPP1 1060 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 PCDHB6Q9Y5E3 794 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 GRIN2DO15399 1336 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 FMNL1O95466 1100 aaPredicted RBP18.98■□□□□ 0.63
LITAF-209ENST00000571688 MYBL2P10244 700 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 CDC25AP30304 524 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 SGMS1Q86VZ5 419 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 IGDCC4Q8TDY8 1250 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 CSRNP2Q9H175 543 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 SAR1BQ9Y6B6 198 aa18.98■□□□□ 0.63
LITAF-209ENST00000571688 LRRC10BA6NIK2 292 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 ENC1O14682 589 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 NDUFA10O95299 355 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 ATP1A1P05023 1023 aaKnown RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 CCT6AP40227 531 aaKnown RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 USP8P40818 1118 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 KRT31Q15323 416 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 SAFBQ15424 915 aaKnown RBP eCLIP18.97■□□□□ 0.63
LITAF-209ENST00000571688 CCNI2Q6ZMN8 369 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 PLBD2Q8NHP8 589 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 ZNF594Q96JF6 807 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 FOXP1Q9H334 677 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 HAUS4Q9H6D7 363 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 LY9Q9HBG7 655 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 EPN1Q9Y6I3 576 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 EIF3HO15372 352 aaKnown RBP eCLIP18.97■□□□□ 0.63
LITAF-209ENST00000571688 FAM69CQ0P6D2 419 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 FBXW10Q5XX13 1052 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 CNPY4Q8N129 248 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 WASF1Q92558 559 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 GDAP1L1Q96MZ0 367 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 NUP88Q99567 741 aaPredicted RBP18.97■□□□□ 0.63
LITAF-209ENST00000571688 CAPS2Q9BXY5 557 aa18.97■□□□□ 0.63
LITAF-209ENST00000571688 KIF1AQ12756 1690 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 A0A087X0B3 334 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 CKAP4Q07065 602 aaKnown RBP18.96■□□□□ 0.63
LITAF-209ENST00000571688 GBP6Q6ZN66 633 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 GSPT2Q8IYD1 628 aaKnown RBP18.96■□□□□ 0.63
LITAF-209ENST00000571688 BCAS4Q8TDM0 211 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 STRN4Q9NRL3 753 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 GOLGA6BA6NDN3 693 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
LITAF-209ENST00000571688 KRT9P35527 623 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 MNAT1P51948 309 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 SMYD4Q8IYR2 804 aaPredicted RBP18.96■□□□□ 0.63
LITAF-209ENST00000571688 CHP1Q99653 195 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 MYL10Q9BUA6 226 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 CEP131Q9UPN4 1083 aa18.96■□□□□ 0.63
LITAF-209ENST00000571688 B4E1Z4 1266 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 N4BP3O15049 544 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ADORA1P30542 326 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 GUCY1A2P33402 732 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 DPYDQ12882 1025 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 SCARF1Q14162 830 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ANKRD20A12PQ8NF67 263 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 PAGE5Q96GU1 130 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 GSDMAQ96QA5 445 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 EHD4Q9H223 541 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 AATFQ9NY61 560 aaKnown RBP eCLIP18.95■□□□□ 0.62
LITAF-209ENST00000571688 KCNJ14Q9UNX9 436 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ABCC12Q96J65 1359 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ATXN2Q99700 1313 aaKnown RBP18.95■□□□□ 0.62
LITAF-209ENST00000571688 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 SRGAP2O75044 1071 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ZMYND10O75800 440 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 IFNAR1P17181 557 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 INPP5BP32019 993 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 MAP2K2P36507 400 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 ZAP70P43403 619 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 AFMP43652 599 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 NFXL1Q6ZNB6 911 aa18.95■□□□□ 0.62
LITAF-209ENST00000571688 AENQ8WTP8 325 aaKnown RBP18.95■□□□□ 0.62
LITAF-209ENST00000571688 SECISBP2LQ93073 1101 aaKnown RBP18.95■□□□□ 0.62
LITAF-209ENST00000571688 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
LITAF-209ENST00000571688 CASP1P29466 404 aa18.94■□□□□ 0.62
LITAF-209ENST00000571688 COPB1P53618 953 aaKnown RBP18.94■□□□□ 0.62
LITAF-209ENST00000571688 SH3GL2Q99962 352 aa18.94■□□□□ 0.62
LITAF-209ENST00000571688 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
LITAF-209ENST00000571688 NID2Q14112 1375 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms