RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 USP17L21D6R901 530 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 HERVK_113P62684 666 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
FANCA-220ENST00000566409 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
FANCA-220ENST00000566409 ADCY3O60266 1144 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 ELNP15502 786 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 Q3C1V9 767 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 CTR9Q6PD62 1173 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 GJD2Q9UKL4 321 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 TTC41PQ6P2S7 1318 aa17.64■□□□□ 0.41
FANCA-220ENST00000566409 RLFQ13129 1914 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 GSG1L2A8MUP6 293 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 RNF113AO15541 343 aaKnown RBP17.63■□□□□ 0.41
FANCA-220ENST00000566409 AKR1B1P15121 316 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 CDK8P49336 464 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 IRF5Q13568 498 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 SLAIN1Q8ND83 568 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 FEZ1Q99689 392 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 SWAP70Q9UH65 585 aa17.63■□□□□ 0.41
FANCA-220ENST00000566409 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
FANCA-220ENST00000566409 CCL5P13501 91 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 VCAM1P19320 739 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
FANCA-220ENST00000566409 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 CLEC10AQ8IUN9 316 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 PXYLP1Q8TE99 480 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 APPBP2Q92624 585 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 COA7Q96BR5 231 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 SHISA4Q96DD7 197 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
FANCA-220ENST00000566409 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 M0R2C6 588 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 CNMDO75829 334 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 MX1P20591 662 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP14P54578 494 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 GPRC5AQ8NFJ5 357 aa17.61■□□□□ 0.41
FANCA-220ENST00000566409 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 INHAP05111 366 aa17.6■□□□□ 0.41
FANCA-220ENST00000566409 ZFYP08048 801 aaPredicted RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 ERVK-9P63128 1117 aa17.6■□□□□ 0.41
FANCA-220ENST00000566409 ERVK-24P63145 666 aa17.6■□□□□ 0.41
FANCA-220ENST00000566409 SEC62Q99442 399 aaKnown RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 UNC93B1Q9H1C4 597 aa17.6■□□□□ 0.41
FANCA-220ENST00000566409 PORCNQ9H237 461 aa17.6■□□□□ 0.41
FANCA-220ENST00000566409 RPAP3Q9H6T3 665 aaPredicted RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 BIN2Q9UBW5 565 aaPredicted RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 GREB1LQ9C091 1923 aaPredicted RBP17.6■□□□□ 0.41
FANCA-220ENST00000566409 ERC2O15083 957 aa17.59■□□□□ 0.41
FANCA-220ENST00000566409 GPAA1O43292 621 aa17.59■□□□□ 0.41
FANCA-220ENST00000566409 SBK1Q52WX2 424 aa17.59■□□□□ 0.41
FANCA-220ENST00000566409 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
FANCA-220ENST00000566409 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.59■□□□□ 0.41
FANCA-220ENST00000566409 RNF208Q9H0X6 261 aa17.59■□□□□ 0.41
FANCA-220ENST00000566409 PARP14Q460N5 1801 aa17.58■□□□□ 0.41
FANCA-220ENST00000566409 GJB1P08034 283 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 UBXN2AP68543 259 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 PRPF38BQ5VTL8 546 aaKnown RBP17.58■□□□□ 0.4
FANCA-220ENST00000566409 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 LBX2Q6XYB7 198 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 GCC1Q96CN9 775 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 CCDC17Q96LX7 622 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 ARPP21Q9UBL0 812 aaPredicted RBP17.58■□□□□ 0.4
FANCA-220ENST00000566409 STAP2Q9UGK3 403 aa17.58■□□□□ 0.4
FANCA-220ENST00000566409 SPDYE16A6NNV3 312 aaPredicted RBP17.57■□□□□ 0.4
FANCA-220ENST00000566409 GJA8P48165 433 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 TRIM32Q13049 653 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 EXOC6Q8TAG9 804 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 GTF3C2Q8WUA4 911 aaPredicted RBP17.57■□□□□ 0.4
FANCA-220ENST00000566409 USP6NLQ92738 828 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 TMX2Q9Y320 296 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 RABGAP1Q9Y3P9 1069 aa17.57■□□□□ 0.4
FANCA-220ENST00000566409 IGHDP01880 384 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 MAPK4P31152 587 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 PDE1AP54750 535 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 ICA1Q05084 483 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 UBE2Q1Q7Z7E8 422 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
FANCA-220ENST00000566409 A0A0G2JMZ2 1700 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms