RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PLCG1P19174 1290 aa6.15□□□□□ -1.43
LINC00561-201ENST00000565815 NOS3P29474 1203 aa6.15□□□□□ -1.43
LINC00561-201ENST00000565815 TRIM28Q13263 835 aaKnown RBP6.15□□□□□ -1.43
LINC00561-201ENST00000565815 MLECQ14165 292 aa6.15□□□□□ -1.43
LINC00561-201ENST00000565815 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.43
LINC00561-201ENST00000565815 MEGF10Q96KG7 1140 aa6.15□□□□□ -1.43
LINC00561-201ENST00000565815 PGRP06401 933 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 RAC1P63000 192 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 EXOSC6Q5RKV6 272 aaKnown RBP6.14□□□□□ -1.43
LINC00561-201ENST00000565815 C2CD4AQ8NCU7 369 aaPredicted RBP6.14□□□□□ -1.43
LINC00561-201ENST00000565815 ISL2Q96A47 359 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 KANSL2Q9H9L4 492 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 TJP2Q9UDY2 1190 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 FAM135AQ9P2D6 1515 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 TIAF1O95411 115 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 RIN3Q8TB24 985 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 CAMSAP1Q5T5Y3 1602 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 CLIP1P30622 1438 aa6.14□□□□□ -1.43
LINC00561-201ENST00000565815 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 SMARCA5O60264 1052 aaPredicted RBP6.13□□□□□ -1.43
LINC00561-201ENST00000565815 ID3Q02535 119 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 ZBTB37Q5TC79 503 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 FBLIM1Q8WUP2 373 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 SEC16BQ96JE7 1060 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 KRT82Q9NSB4 513 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 DAGLAQ9Y4D2 1042 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 DIP2CQ9Y2E4 1556 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 SIGLEC1Q9BZZ2 1709 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 KRBA1A5PL33 1030 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 ARSHQ5FYA8 562 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 LARP1BQ659C4 914 aaKnown RBP6.13□□□□□ -1.43
LINC00561-201ENST00000565815 IGF2-ASQ6U949 168 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 DDX54Q8TDD1 881 aaKnown RBP6.13□□□□□ -1.43
LINC00561-201ENST00000565815 ZNF512BQ96KM6 892 aaPredicted RBP6.13□□□□□ -1.43
LINC00561-201ENST00000565815 CNTNAP4Q9C0A0 1308 aa6.13□□□□□ -1.43
LINC00561-201ENST00000565815 TCOF1Q13428 1488 aaKnown RBP6.13□□□□□ -1.43
LINC00561-201ENST00000565815 KLF4O43474 513 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 STK10O94804 968 aaKnown RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 SOX4Q06945 474 aaPredicted RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 TDRD10Q5VZ19 366 aaKnown RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 MRM1Q6IN84 353 aaKnown RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 DTWD1Q8N5C7 304 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 PCGF6Q9BYE7 350 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 RNF208Q9H0X6 261 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 LTBP3Q9NS15 1303 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 GIPRP48546 466 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 MBTPS1Q14703 1052 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 VPS37DQ86XT2 251 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 CACTIN-AS1Q8N1I8 211 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 SLC9A7Q96T83 725 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 SEMA6CQ9H3T2 930 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 SLC22A31A6NKX4 558 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 ITGB2P05107 769 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 PRAMEF13Q5VWM6 474 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 FDX2Q6P4F2 183 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
LINC00561-201ENST00000565815 HDXQ7Z353 690 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 ARMC10Q8N2F6 343 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
LINC00561-201ENST00000565815 KIF14Q15058 1648 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 RNGTTO60942 597 aaKnown RBP6.11□□□□□ -1.43
LINC00561-201ENST00000565815 NFICP08651 508 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 ASPAP45381 313 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 ZNF165P49910 485 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 SLBPQ14493 270 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC00561-201ENST00000565815 CCDC84Q86UT8 332 aaPredicted RBP6.11□□□□□ -1.43
LINC00561-201ENST00000565815 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 FMN1Q68DA7 1419 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 CEBPAP49715 358 aaPredicted RBP6.11□□□□□ -1.43
LINC00561-201ENST00000565815 TTC6Q86TZ1 520 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
LINC00561-201ENST00000565815 AKTIPQ9H8T0 292 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 PRR36Q9H6K5 1346 aa6.11□□□□□ -1.43
LINC00561-201ENST00000565815 SPATA31C1P0DKV0 1188 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 ERVK-24P63145 666 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 RBL2Q08999 1139 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 CD163Q86VB7 1156 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 WFDC12Q8WWY7 111 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 A2ML1A8K2U0 1454 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 ADGRE1Q14246 886 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 PODNQ7Z5L7 613 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 MAP4K3Q8IVH8 894 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 BEND7Q8N7W2 519 aaPredicted RBP6.1□□□□□ -1.43
LINC00561-201ENST00000565815 U3KQE9 123 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 TROQ12816 1431 aaPredicted RBP6.1□□□□□ -1.43
LINC00561-201ENST00000565815 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
LINC00561-201ENST00000565815 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 C9IYK1 514 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 GSK3AP49840 483 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 BAHD1Q8TBE0 780 aaPredicted RBP6.09□□□□□ -1.43
LINC00561-201ENST00000565815 KIF2CQ99661 725 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 ZMYM3Q14202 1370 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 ARHGAP5Q13017 1502 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 ATE1O95260 518 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms