RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 LRRC41Q15345 812 aa16.19■□□□□ 0.18
RPAP1-206ENST00000564934 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
RPAP1-206ENST00000564934 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
RPAP1-206ENST00000564934 XIRP2A4UGR9 3374 aa16.19■□□□□ 0.18
RPAP1-206ENST00000564934 CHD9Q3L8U1 2897 aa16.18■□□□□ 0.18
RPAP1-206ENST00000564934 SEPT4O43236 478 aa16.18■□□□□ 0.18
RPAP1-206ENST00000564934 TFF2Q03403 129 aa16.18■□□□□ 0.18
RPAP1-206ENST00000564934 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
RPAP1-206ENST00000564934 ATG9AQ7Z3C6 839 aa16.18■□□□□ 0.18
RPAP1-206ENST00000564934 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
RPAP1-206ENST00000564934 KCNQ1P51787 676 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 MECOMQ03112 1051 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.17■□□□□ 0.188e-7■■□□□ 13.2
RPAP1-206ENST00000564934 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
RPAP1-206ENST00000564934 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 TMEM39AQ9NV64 488 aa16.17■□□□□ 0.18
RPAP1-206ENST00000564934 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
RPAP1-206ENST00000564934 GDF11O95390 407 aa16.16■□□□□ 0.18
RPAP1-206ENST00000564934 OLFML2BQ68BL8 750 aa16.16■□□□□ 0.18
RPAP1-206ENST00000564934 ZNF384Q8TF68 577 aa16.16■□□□□ 0.18
RPAP1-206ENST00000564934 PHF24Q9UPV7 400 aa16.16■□□□□ 0.18
RPAP1-206ENST00000564934 ADORA1P30542 326 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
RPAP1-206ENST00000564934 CCDC102BQ68D86 513 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 USP17L2Q6R6M4 530 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 DPP9Q86TI2 863 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 SIL1Q9H173 461 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
RPAP1-206ENST00000564934 AAK1Q2M2I8 961 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 CEP126Q9P2H0 1117 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 ZBTB21Q9ULJ3 1066 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 SIPA1L1O43166 1804 aa16.14■□□□□ 0.17
RPAP1-206ENST00000564934 PDS5AQ29RF7 1337 aaKnown RBP16.14■□□□□ 0.17
RPAP1-206ENST00000564934 FAM86C2PA6NEL3 165 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L15C9J2P7 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L13C9JLJ4 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L11C9JVI0 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L18D6R9N7 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L22D6RA61 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L17D6RBQ6 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L19D6RCP7 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L20D6RJB6 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 MAP4K4O95819 1239 aaPredicted RBP16.13■□□□□ 0.17
RPAP1-206ENST00000564934 ADORA2AP29274 412 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 FAAP100Q0VG06 881 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 USP17L24Q0WX57 530 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
RPAP1-206ENST00000564934 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 CHD7Q9P2D1 2997 aa16.13■□□□□ 0.17
RPAP1-206ENST00000564934 A0A1W2PQ45 241 aaPredicted RBP16.12■□□□□ 0.17
RPAP1-206ENST00000564934 A0A1W2PQY0 241 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 ZBTB22O15209 634 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 GPR37L1O60883 481 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 RAB30Q15771 203 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 TMEM240Q5SV17 173 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 C16orf59Q7L2K0 433 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 NKX2-4Q9H2Z4 354 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
RPAP1-206ENST00000564934 REV3LO60673 3130 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 TIMP1P01033 207 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
RPAP1-206ENST00000564934 SKIV2LQ15477 1246 aaKnown RBP16.11■□□□□ 0.17
RPAP1-206ENST00000564934 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 C12orf42Q96LP6 360 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 FEZ1Q99689 392 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 TRIM34Q9BYJ4 488 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
RPAP1-206ENST00000564934 GINM1Q9NU53 330 aa16.11■□□□□ 0.17
RPAP1-206ENST00000564934 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 COBLO75128 1261 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 CIAO1O76071 339 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 PGK1P00558 417 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 LDHCP07864 332 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 VCAM1P19320 739 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 MRE11P49959 708 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 GSTO1P78417 241 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 MFSD5Q6N075 450 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 CATSPERGQ6ZRH7 1159 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 RNF180Q86T96 592 aa16.1■□□□□ 0.17
RPAP1-206ENST00000564934 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 KHSRPQ92945 711 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
RPAP1-206ENST00000564934 SLC28A3Q9HAS3 691 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms