RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 BRMS1Q9HCU9 246 aa8.32□□□□□ -1.08
UBR1-205ENST00000564540 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
UBR1-205ENST00000564540 CHURC1-FNTBB4DL54 471 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 ZNF865P0CJ78 1059 aaPredicted RBP8.31□□□□□ -1.08
UBR1-205ENST00000564540 CDKAL1Q5VV42 579 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 MFSD4AQ8N468 514 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 LRRC3Q9BY71 257 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 PCDHGB7Q9Y5F8 929 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 SNX11Q9Y5W9 270 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 CAPN6Q9Y6Q1 641 aa8.31□□□□□ -1.08
UBR1-205ENST00000564540 YARSP54577 528 aaKnown RBP8.3□□□□□ -1.08
UBR1-205ENST00000564540 ZNF394Q53GI3 561 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 ZNF746Q6NUN9 644 aaPredicted RBP8.3□□□□□ -1.08
UBR1-205ENST00000564540 C22orf34Q6ZV56 151 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 HSPA12BQ96MM6 686 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 PCDHB14Q9Y5E9 798 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 ROBO2Q9HCK4 1378 aa8.3□□□□□ -1.08
UBR1-205ENST00000564540 FUT4P22083 530 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 CLCN7P51798 805 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 SEZ6Q53EL9 994 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 CBLL1Q75N03 491 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 USP48Q86UV5 1035 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 SLFN12Q8IYM2 578 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 CEP131Q9UPN4 1083 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
UBR1-205ENST00000564540 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 H3BS24 57 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 CYP7A1P22680 504 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 VAMP1P23763 118 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 ETV3P41162 512 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 APOBRQ0VD83 1088 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 ZNF792Q3KQV3 632 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 KIAA0825Q8IV33 1275 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 ASB11Q8WXH4 323 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 MRRFQ96E11 262 aaKnown RBP8.28□□□□□ -1.08
UBR1-205ENST00000564540 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
UBR1-205ENST00000564540 SPON2Q9BUD6 331 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 PRDM7Q9NQW5 492 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 METTL5Q9NRN9 209 aaKnown RBP8.28□□□□□ -1.08
UBR1-205ENST00000564540 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
UBR1-205ENST00000564540 TNK2Q07912 1038 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 IKZF1Q13422 519 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 BAHD1Q8TBE0 780 aaPredicted RBP8.27□□□□□ -1.09
UBR1-205ENST00000564540 RNF34Q969K3 372 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 SEMA3GQ9NS98 782 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
UBR1-205ENST00000564540 ST14Q9Y5Y6 855 aa8.27□□□□□ -1.09
UBR1-205ENST00000564540 RACK1P63244 317 aaKnown RBP8.26□□□□□ -1.09
UBR1-205ENST00000564540 CLCQ05315 142 aa8.26□□□□□ -1.09
UBR1-205ENST00000564540 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
UBR1-205ENST00000564540 GK5Q6ZS86 529 aa8.26□□□□□ -1.09
UBR1-205ENST00000564540 Q96M66 194 aa8.26□□□□□ -1.09
UBR1-205ENST00000564540 KIF2CQ99661 725 aa8.26□□□□□ -1.09
UBR1-205ENST00000564540 NT5C1AQ9BXI3 368 aa8.26□□□□□ -1.09
UBR1-205ENST00000564540 MBNL3Q9NUK0 354 aaKnown RBP8.26□□□□□ -1.09
UBR1-205ENST00000564540 SLC22A31A6NKX4 558 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
UBR1-205ENST00000564540 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
UBR1-205ENST00000564540 MCM4P33991 863 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 KIR3DL1P43629 444 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 TNNI2P48788 182 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 ARSHQ5FYA8 562 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 OGFOD2Q6N063 350 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 PHACTR4Q8IZ21 702 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 PI4K2BQ8TCG2 481 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 NKD1Q969G9 470 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 COX4I2Q96KJ9 171 aa8.25□□□□□ -1.09
UBR1-205ENST00000564540 ATE1O95260 518 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 ZP2Q05996 745 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 POU5F2Q8N7G0 328 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 UBE2FQ969M7 185 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 CCDC74BQ96LY2 380 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 ZSWIM5Q9P217 1185 aa8.24□□□□□ -1.09
UBR1-205ENST00000564540 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
UBR1-205ENST00000564540 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 LRRN2O75325 713 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 MLECQ14165 292 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 OVOS1Q6IE37 1185 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 METTL16Q86W50 562 aaKnown RBP8.23□□□□□ -1.09
UBR1-205ENST00000564540 SLITRK4Q8IW52 837 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 KRTAP4-11Q9BYQ6 195 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 ANTXR1Q9H6X2 564 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 RC3H2Q9HBD1 1191 aaKnown RBP8.23□□□□□ -1.09
UBR1-205ENST00000564540 GMIPQ9P107 970 aa8.23□□□□□ -1.09
UBR1-205ENST00000564540 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
UBR1-205ENST00000564540 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
UBR1-205ENST00000564540 REXO1Q8N1G1 1221 aaKnown RBP8.22□□□□□ -1.09
UBR1-205ENST00000564540 LRRN4CLQ8ND94 238 aa8.22□□□□□ -1.09
UBR1-205ENST00000564540 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
UBR1-205ENST00000564540 CARS2Q9HA77 564 aaKnown RBP8.22□□□□□ -1.09
UBR1-205ENST00000564540 UBOX5O94941 541 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 C8AP07357 584 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 RAG1P15918 1043 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 POLR2BP30876 1174 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms