RNA–Protein interactions for RNA: ENST00000561773.1

TIPIN-202, Transcript of TIMELESS interacting protein, humanhuman

TSL 3

Gene TIPIN, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-202ENST00000561773 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
TIPIN-202ENST00000561773 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
TIPIN-202ENST00000561773 MCM9Q9NXL9 1143 aa12.84□□□□□ -0.35
TIPIN-202ENST00000561773 PLXNA1Q9UIW2 1896 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 C19orf81C9J6K1 198 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 GNRH1P01148 92 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 FAM110CQ1W6H9 321 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 CERKLQ49MI3 558 aaPredicted RBP12.83□□□□□ -0.36
TIPIN-202ENST00000561773 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
TIPIN-202ENST00000561773 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 ATP8A2Q9NTI2 1148 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
TIPIN-202ENST00000561773 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
TIPIN-202ENST00000561773 IGHA2P01877 340 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 AKR1B1P15121 316 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 SBK1Q52WX2 424 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 C16orf86Q6ZW13 317 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 USP6NLQ92738 828 aa12.82□□□□□ -0.36
TIPIN-202ENST00000561773 ROBO3Q96MS0 1386 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 ZNF236Q9UL36 1845 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 CDK8P49336 464 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 PDE1AP54750 535 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 PRMT2P55345 433 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 HERVK_113P62684 666 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 ZMYM1Q5SVZ6 1142 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 APPBP2Q92624 585 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 AS3MTQ9HBK9 375 aa12.81□□□□□ -0.36
TIPIN-202ENST00000561773 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
TIPIN-202ENST00000561773 VCAM1P19320 739 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 MX1P20591 662 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 FLT3LGP49771 235 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 IRF5Q13568 498 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 USP17L2Q6R6M4 530 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
TIPIN-202ENST00000561773 PORCNQ9H237 461 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 SLC4A4Q9Y6R1 1079 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 LAMA2P24043 3122 aaKnown RBP12.8□□□□□ -0.36
TIPIN-202ENST00000561773 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
TIPIN-202ENST00000561773 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 GPAA1O43292 621 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
TIPIN-202ENST00000561773 ELNP15502 786 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 RASA1P20936 1047 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
TIPIN-202ENST00000561773 TRIM32Q13049 653 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 SLC9C1Q4G0N8 1177 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 LBX2Q6XYB7 198 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
TIPIN-202ENST00000561773 SZT2Q5T011 3432 aa12.79□□□□□ -0.36
TIPIN-202ENST00000561773 LCTP09848 1927 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 MCM3APO60318 1980 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
TIPIN-202ENST00000561773 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
TIPIN-202ENST00000561773 GRK4P32298 578 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 FCGRTP55899 365 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 RAB3GAP1Q15042 981 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
TIPIN-202ENST00000561773 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
TIPIN-202ENST00000561773 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
TIPIN-202ENST00000561773 NUCB1Q02818 461 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 KIF22Q14807 665 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 MORN1Q5T089 497 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 TMEM179Q6ZVK1 233 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
TIPIN-202ENST00000561773 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 INCENPQ9NQS7 918 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 SWAP70Q9UH65 585 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 PATL2C9JE40 543 aaKnown RBP12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 ADCY3O60266 1144 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
TIPIN-202ENST00000561773 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
TIPIN-202ENST00000561773 CCL5P13501 91 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 PDE4AP27815 886 aa12.76□□□□□ -0.37
TIPIN-202ENST00000561773 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms