RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 HERVK_113P62684 666 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 C12orf60Q5U649 245 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 USP17L2Q6R6M4 530 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 USP17L12C9JPN9 530 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 USP17L21D6R901 530 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 ELNP15502 786 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 ZSCAN25Q6NSZ9 544 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 GPATCH3Q96I76 525 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 FEZ1Q99689 392 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 KIAA1683Q9H0B3 1180 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
TNFAIP2-207ENST00000560562 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 M0R2C6 588 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 AKR1B1P15121 316 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 VCAM1P19320 739 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 TMEM106CQ9BVX2 250 aa16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
TNFAIP2-207ENST00000560562 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 MPHOSPH10O00566 681 aaKnown RBP16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 ADCY3O60266 1144 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 CNMDO75829 334 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 CDK8P49336 464 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 Q3C1V9 767 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 C16orf86Q6ZW13 317 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 APPBP2Q92624 585 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
TNFAIP2-207ENST00000560562 CCL5P13501 91 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 MX1P20591 662 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 IRF5Q13568 498 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 SLAIN1Q8ND83 568 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 PORCNQ9H237 461 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 ALPK3Q96L96 1907 aa16.84■□□□□ 0.29
TNFAIP2-207ENST00000560562 GPAA1O43292 621 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 INHAP05111 366 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 ERVK-9P63128 1117 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 ERVK-24P63145 666 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 ANKRD45Q5TZF3 282 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 CATSPERGQ6ZRH7 1159 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 COA7Q96BR5 231 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 PAGR1Q9BTK6 254 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.28
TNFAIP2-207ENST00000560562 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 FRMPD3Q5JV73 1810 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L15C9J2P7 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L13C9JLJ4 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L11C9JVI0 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L18D6R9N7 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L22D6RA61 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L17D6RBQ6 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L19D6RCP7 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L20D6RJB6 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 GLRX3O76003 335 aaKnown RBP16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP14P54578 494 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP17L24Q0WX57 530 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 TMEM179Q6ZVK1 233 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 PXYLP1Q8TE99 480 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
TNFAIP2-207ENST00000560562 SPDYE16A6NNV3 312 aaPredicted RBP16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 ERC2O15083 957 aa16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 TRIM32Q13049 653 aa16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 GPRC5AQ8NFJ5 357 aa16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
TNFAIP2-207ENST00000560562 FOXP2O15409 715 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 ZFYP08048 801 aaPredicted RBP16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 ICA1Q05084 483 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 SBK1Q52WX2 424 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 RNF208Q9H0X6 261 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 BTBD7Q9P203 1132 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
TNFAIP2-207ENST00000560562 IGHDP01880 384 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 GJB1P08034 283 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 RASA1P20936 1047 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 PRPF38BQ5VTL8 546 aaKnown RBP16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 LBX2Q6XYB7 198 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 TRIB2Q92519 343 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms