RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZKSCAN4Q969J2 545 aaPredicted RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 GBA2Q9HCG7 927 aaPredicted RBP19.43■□□□□ 0.7
TPM1-219ENST00000559397 IGKV6D-41A0A0C4DH26 115 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 GH2P01242 217 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 TSPY3P0CV98 308 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 TSPY8P0CW00 308 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 ANTXR2P58335 489 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 TTLL12Q14166 644 aaPredicted RBP19.42■□□□□ 0.7
TPM1-219ENST00000559397 ME3Q16798 604 aa19.42■□□□□ 0.7
TPM1-219ENST00000559397 NOL9Q5SY16 702 aaKnown RBP19.42■□□□□ 0.7
TPM1-219ENST00000559397 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.42■□□□□ 0.7
TPM1-219ENST00000559397 MPHOSPH10O00566 681 aaKnown RBP19.41■□□□□ 0.7
TPM1-219ENST00000559397 NUCB2P80303 420 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 LDLRAD1Q5T700 205 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 TMEM179Q6ZVK1 233 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 IL17RBQ9NRM6 502 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 GINM1Q9NU53 330 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 TCP11L1Q9NUJ3 509 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 ZBTB21Q9ULJ3 1066 aa19.41■□□□□ 0.7
TPM1-219ENST00000559397 UBE2Q2LH0YL09 131 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 MCM5P33992 734 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 VGLL4Q14135 290 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 Q6ZUG5 572 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 CHST3Q7LGC8 479 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 SCYL3Q8IZE3 742 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 C2orf69Q8N8R5 385 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 WDR19Q8NEZ3 1342 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 ASNSP08243 561 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 ST3GAL1Q11201 340 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 SEPT2Q15019 361 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 ANKRD13AQ8IZ07 590 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 SNCAIPQ9Y6H5 919 aa19.4■□□□□ 0.7
TPM1-219ENST00000559397 UNCXA6NJT0 531 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 PRC1O43663 620 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 NMT2O60551 498 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 NOVP48745 357 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 NBR1Q14596 966 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
TPM1-219ENST00000559397 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.39■□□□□ 0.69
TPM1-219ENST00000559397 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.39■□□□□ 0.69
TPM1-219ENST00000559397 IQCA1Q86XH1 822 aa19.38■□□□□ 0.69
TPM1-219ENST00000559397 CEP95Q96GE4 821 aa19.38■□□□□ 0.69
TPM1-219ENST00000559397 ZSCAN10Q96SZ4 725 aaPredicted RBP19.38■□□□□ 0.69
TPM1-219ENST00000559397 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
TPM1-219ENST00000559397 CSADQ9Y600 493 aa19.38■□□□□ 0.69
TPM1-219ENST00000559397 PHIPQ8WWQ0 1821 aa19.38■□□□□ 0.69
TPM1-219ENST00000559397 CLEC10AQ8IUN9 316 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 SIAH1Q8IUQ4 282 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 IGDCC4Q8TDY8 1250 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 TNPO1Q92973 898 aaKnown RBP19.37■□□□□ 0.69
TPM1-219ENST00000559397 CLMNQ96JQ2 1002 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 LRRC2Q9BYS8 371 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 MTMR4Q9NYA4 1195 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 TNKSO95271 1327 aa19.37■□□□□ 0.69
TPM1-219ENST00000559397 PTPRAP18433 802 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 EVCP57679 992 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 SEC23AQ15436 765 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 RCSD1Q6JBY9 416 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 CCDC83Q8IWF9 413 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 ENAHQ8N8S7 591 aaPredicted RBP19.36■□□□□ 0.69
TPM1-219ENST00000559397 TMEM87BQ96K49 555 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 PICK1Q9NRD5 415 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 CCDC84Q86UT8 332 aaPredicted RBP19.36■□□□□ 0.69
TPM1-219ENST00000559397 ANKS1AQ92625 1134 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 BRF1Q92994 677 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 UBAC1Q9BSL1 405 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 ELP3Q9H9T3 547 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 GPHNQ9NQX3 736 aaPredicted RBP19.36■□□□□ 0.69
TPM1-219ENST00000559397 ZDHHC9Q9Y397 364 aa19.36■□□□□ 0.69
TPM1-219ENST00000559397 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 SH2B2O14492 632 aaPredicted RBP19.35■□□□□ 0.69
TPM1-219ENST00000559397 IFIT3O14879 490 aaKnown RBP19.35■□□□□ 0.69
TPM1-219ENST00000559397 ICA1Q05084 483 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 PKP1Q13835 747 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 CCDC178Q5BJE1 867 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 DGKHQ86XP1 1220 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 NECAB1Q8N987 351 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 NYAP2Q9P242 653 aa19.35■□□□□ 0.69
TPM1-219ENST00000559397 TTLL1O95922 423 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 EEF2P13639 858 aaKnown RBP19.34■□□□□ 0.69
TPM1-219ENST00000559397 HUNKP57058 714 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 SART3Q15020 963 aaKnown RBP19.34■□□□□ 0.69
TPM1-219ENST00000559397 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 MKL1Q969V6 931 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 LY9Q9HBG7 655 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 SENP2Q9HC62 589 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 TLL2Q9Y6L7 1015 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 MYH4Q9Y623 1939 aa19.34■□□□□ 0.69
TPM1-219ENST00000559397 SPDYE5A6NIY4 337 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 PFKFB2O60825 505 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 BRD1O95696 1058 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 LIFRP42702 1097 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 FGD1P98174 961 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms