RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ATP8A2Q9NTI2 1148 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 LOC285556D6RIA3 1793 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 MINDY4BA8MYZ0 360 aa15.05■□□□□ -0
SMAD3-208ENST00000558827 GRK4P32298 578 aa15.05■□□□□ -0
SMAD3-208ENST00000558827 CTR9Q6PD62 1173 aa15.05■□□□□ -0
SMAD3-208ENST00000558827 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
SMAD3-208ENST00000558827 FSD1Q9BTV5 496 aa15.05■□□□□ -0
SMAD3-208ENST00000558827 GINM1Q9NU53 330 aa15.05■□□□□ -0
SMAD3-208ENST00000558827 DDX60LQ5H9U9 1706 aaKnown RBP15.04■□□□□ -0
SMAD3-208ENST00000558827 A0A1W2PRG0 241 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 ADCY3O60266 1144 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 GNRH1P01148 92 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 APPP05067 770 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 MX1P20591 662 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 CDK8P49336 464 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 PRMT2P55345 433 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 HERVK_113P62684 666 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 ATP2B2Q01814 1243 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 Q3C1V9 767 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 C12orf60Q5U649 245 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 APPBP2Q92624 585 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 LNPKQ9C0E8 428 aa15.04■□□□□ -0
SMAD3-208ENST00000558827 GSG1L2A8MUP6 293 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 ERC2O15083 957 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 GPAA1O43292 621 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 IGHDP01880 384 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 HOXA7P31268 230 aaPredicted RBP15.03■□□□□ -0
SMAD3-208ENST00000558827 GCLCP48506 637 aaPredicted RBP15.03■□□□□ -0
SMAD3-208ENST00000558827 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 KIAA1755Q5JYT7 1200 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 POTEEQ6S8J3 1075 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 CCDC129Q6ZRS4 1044 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 AMOTL1Q8IY63 956 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 COA7Q96BR5 231 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
SMAD3-208ENST00000558827 TTC41PQ6P2S7 1318 aa15.02■□□□□ -0
SMAD3-208ENST00000558827 RAD21O60216 631 aa15.02■□□□□ -0
SMAD3-208ENST00000558827 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
SMAD3-208ENST00000558827 VCAM1P19320 739 aa15.02■□□□□ -0
SMAD3-208ENST00000558827 HDAC1Q13547 482 aaPredicted RBP15.02■□□□□ -0
SMAD3-208ENST00000558827 SPICE1Q8N0Z3 855 aa15.02■□□□□ -0
SMAD3-208ENST00000558827 RPAP3Q9H6T3 665 aaPredicted RBP15.02■□□□□ -0
SMAD3-208ENST00000558827 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L17D6RBQ6 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L19D6RCP7 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L20D6RJB6 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 CCL5P13501 91 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 CYP2B6P20813 491 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 USP17L24Q0WX57 530 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 WDR78Q5VTH9 848 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 SIAH1Q8IUQ4 282 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 KIAA1683Q9H0B3 1180 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 RNF208Q9H0X6 261 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 UNC93B1Q9H1C4 597 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 PORCNQ9H237 461 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 EPB41L4AQ9HCS5 686 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-208ENST00000558827 SWAP70Q9UH65 585 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 MYH8P13535 1937 aa15.01□□□□□ -0.01
SMAD3-208ENST00000558827 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 PRDM1O75626 825 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 INHAP05111 366 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 TDO2P48775 406 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 USP14P54578 494 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 PDE1AP54750 535 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 TRIM32Q13049 653 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 CATSPERGQ6ZRH7 1159 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
SMAD3-208ENST00000558827 TANGO6Q9C0B7 1094 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 MORF4L1Q9UBU8 362 aa15□□□□□ -0.01
SMAD3-208ENST00000558827 CNMDO75829 334 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 ZFYP08048 801 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-208ENST00000558827 ERVK-9P63128 1117 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 ERVK-24P63145 666 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 UBXN2AP68543 259 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 ICA1Q05084 483 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 SLAIN1Q8ND83 568 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 RWDD1Q9H446 243 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-208ENST00000558827 MKNK2Q9HBH9 465 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
SMAD3-208ENST00000558827 GJD2Q9UKL4 321 aa14.99□□□□□ -0.01
SMAD3-208ENST00000558827 PATL2C9JE40 543 aaKnown RBP14.98□□□□□ -0.01
SMAD3-208ENST00000558827 EEF2P13639 858 aaKnown RBP14.98□□□□□ -0.01
SMAD3-208ENST00000558827 ZMYM1Q5SVZ6 1142 aa14.98□□□□□ -0.01
SMAD3-208ENST00000558827 IFNL3Q8IZI9 196 aa14.98□□□□□ -0.01
SMAD3-208ENST00000558827 ARHGEF10LQ9HCE6 1279 aa14.98□□□□□ -0.01
SMAD3-208ENST00000558827 BTBD7Q9P203 1132 aa14.98□□□□□ -0.01
SMAD3-208ENST00000558827 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-208ENST00000558827 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
SMAD3-208ENST00000558827 RASA1P20936 1047 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms