RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 IL25Q9H293 177 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 AGTPBP1Q9UPW5 1226 aa18.87■□□□□ 0.61
RABGGTA-206ENST00000558649 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 FKTNO75072 461 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 FGAP02671 866 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 HAND2P61296 217 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 ICA1Q05084 483 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 PDE4BQ07343 736 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 ERICH6BQ5W0A0 696 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 PARK7Q99497 189 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 ZNF287Q9HBT7 754 aa18.86■□□□□ 0.61
RABGGTA-206ENST00000558649 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 ALX1Q15699 326 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 USP17L2Q6R6M4 530 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 ZNF444Q8N0Y2 327 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 INCENPQ9NQS7 918 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 TOMM22Q9NS69 142 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 CPA4Q9UI42 421 aa18.85■□□□□ 0.61
RABGGTA-206ENST00000558649 ZSWIM8A7E2V4 1837 aa18.84■□□□□ 0.61
RABGGTA-206ENST00000558649 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
RABGGTA-206ENST00000558649 TLR2O60603 784 aa18.84■□□□□ 0.61
RABGGTA-206ENST00000558649 ARHGEF10LQ9HCE6 1279 aa18.84■□□□□ 0.61
RABGGTA-206ENST00000558649 EMILIN3Q9NT22 766 aa18.84■□□□□ 0.61
RABGGTA-206ENST00000558649 RAD50Q92878 1312 aa18.83■□□□□ 0.61
RABGGTA-206ENST00000558649 A0A1W2PRG0 241 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 USP14P54578 494 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 SP3Q02447 781 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 PABPC4Q13310 644 aaKnown RBP eCLIP18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 FAM47AQ5JRC9 791 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 TNS4Q8IZW8 715 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 CD99L2Q8TCZ2 262 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 KIAA1683Q9H0B3 1180 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 PNMA3Q9UL41 463 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 SLC45A1Q9Y2W3 748 aa18.83■□□□□ 0.6
RABGGTA-206ENST00000558649 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 RAD21O60216 631 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 TSPY3P0CV98 308 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 TSPY8P0CW00 308 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 EEF2P13639 858 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 OSBPP22059 807 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 IRX3P78415 501 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 RRP12Q5JTH9 1297 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 ASCC2Q9H1I8 757 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 KANSL2Q9H9L4 492 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
RABGGTA-206ENST00000558649 ADGRA2Q96PE1 1338 aa18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 RANBP6O60518 1105 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 VCAM1P19320 739 aa18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 SH2D4AQ9H788 454 aa18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 TACC3Q9Y6A5 838 aa18.81■□□□□ 0.6
RABGGTA-206ENST00000558649 TSPY2A6NKD2 308 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 TFAP4Q01664 338 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 TBC1D10CQ8IV04 446 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 SPICE1Q8N0Z3 855 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 ERO1AQ96HE7 468 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
RABGGTA-206ENST00000558649 ZNF213O14771 459 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 SGSM2O43147 1006 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 C17orf99Q6UX52 265 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 C12orf42Q96LP6 360 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-206ENST00000558649 PTH1RQ03431 593 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 KIF22Q14807 665 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 KIAA1755Q5JYT7 1200 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 ANKRD13CQ8N6S4 541 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 MCOLN1Q9GZU1 580 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 CLIP2Q9UDT6 1046 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 CTNNA3Q9UI47 895 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 TMX2Q9Y320 296 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 TRIM17Q9Y577 477 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 PLIN4Q96Q06 1357 aa18.78■□□□□ 0.6
RABGGTA-206ENST00000558649 MGAMO43451 1857 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 NEDD4P46934 1319 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 IGKV6D-41A0A0C4DH26 115 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
RABGGTA-206ENST00000558649 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms