RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 ZNF654Q8IZM8 581 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 TRIML1Q8N9V2 468 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 ZDHHC16Q969W1 377 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 FAM84BQ96KN1 310 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 ZSCAN10Q96SZ4 725 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 EPAS1Q99814 870 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 RIOK1Q9BRS2 568 aaKnown RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 ARPP21Q9UBL0 812 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 TUBE1Q9UJT0 475 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 A0A1B0GVL5 298 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 AP5Z1O43299 807 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 DTNBO60941 627 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 LDHCP07864 332 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 KCNJ6P48051 423 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 CTDSPL2Q05D32 466 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 PDE4BQ07343 736 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 CCDC186Q7Z3E2 898 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 NBPF11Q86T75 865 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 DHX40Q8IX18 779 aaKnown RBP9.56□□□□□ -0.88
SPG11-209ENST00000558253 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 MYRIPQ8NFW9 859 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 WDR66Q8TBY9 1149 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPG11-209ENST00000558253 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
SPG11-209ENST00000558253 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 ZNF287Q9HBT7 754 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 TOMM22Q9NS69 142 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
SPG11-209ENST00000558253 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 CCP110O43303 1012 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 KCNQ2O43526 872 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 PRKAB2O43741 272 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 RANBP6O60518 1105 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 PTPREP23469 700 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 KIF5BP33176 963 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 GYG1P46976 350 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 GNAQP50148 359 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 FAM98CQ17RN3 349 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 RRP12Q5JTH9 1297 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 IFIT1BQ5T764 474 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 OTUD7BQ6GQQ9 843 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 DIS3L2Q8IYB7 885 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 MLKLQ8NB16 471 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 SPC24Q8NBT2 197 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 ANKS1AQ92625 1134 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 DDX12PQ92771 950 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 PHKBQ93100 1093 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 NSUN4Q96CB9 384 aaKnown RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 OSBPL5Q9H0X9 879 aaPredicted RBP9.55□□□□□ -0.88
SPG11-209ENST00000558253 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 C4AP0C0L4 1744 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 C4BP0C0L5 1744 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 TNKSO95271 1327 aa9.55□□□□□ -0.88
SPG11-209ENST00000558253 UQCRHLA0A096LP55 91 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 MINDY4BA8MYZ0 360 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 WDHD1O75717 1129 aaPredicted RBP9.54□□□□□ -0.88
SPG11-209ENST00000558253 BAG3O95817 575 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 UQCRHP07919 91 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 PTGS1P23219 599 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 GALNT17Q6IS24 598 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 C11orf57Q6ZUT1 292 aaPredicted RBP9.54□□□□□ -0.88
SPG11-209ENST00000558253 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 MIGA1Q8NAN2 632 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 CTCFLQ8NI51 663 aaPredicted RBP9.54□□□□□ -0.88
SPG11-209ENST00000558253 LZTS2Q9BRK4 669 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 SH3GLB2Q9NR46 395 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 CCNL1Q9UK58 526 aaPredicted RBP9.54□□□□□ -0.88
SPG11-209ENST00000558253 SRPRBQ9Y5M8 271 aaKnown RBP9.54□□□□□ -0.88
SPG11-209ENST00000558253 SCN7AQ01118 1682 aa9.54□□□□□ -0.88
SPG11-209ENST00000558253 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 SMC2O95347 1197 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 CALML3P27482 149 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 RFC4P35249 363 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 KRT2P35908 639 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 PPP4CP60510 307 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 MYL5Q02045 173 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 MECOMQ03112 1051 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 GRAPQ13588 217 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 SYCP1Q15431 976 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 NT5DC1Q5TFE4 455 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 CTR9Q6PD62 1173 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 SHC4Q6S5L8 630 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 KRBA2Q6ZNG9 492 aa9.53□□□□□ -0.88
SPG11-209ENST00000558253 DGKHQ86XP1 1220 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms