RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
ABCD4-224ENST00000556119 GRXCR1A8MXD5 290 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 ZBTB22O15209 634 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 ASNSP08243 561 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 GRB14Q14449 540 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 LRRC41Q15345 812 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 ATP2B3Q16720 1220 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 ALYREFQ86V81 257 aaKnown RBP16.49■□□□□ 0.23
ABCD4-224ENST00000556119 GBF1Q92538 1859 aa16.49■□□□□ 0.23
ABCD4-224ENST00000556119 SEPT4O43236 478 aa16.48■□□□□ 0.23
ABCD4-224ENST00000556119 CCNA1P78396 465 aa16.48■□□□□ 0.23
ABCD4-224ENST00000556119 MECOMQ03112 1051 aa16.48■□□□□ 0.23
ABCD4-224ENST00000556119 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.48■□□□□ 0.233e-7■□□□□ 11.3
ABCD4-224ENST00000556119 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
ABCD4-224ENST00000556119 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
ABCD4-224ENST00000556119 IGFBP4P22692 258 aa16.47■□□□□ 0.23
ABCD4-224ENST00000556119 TFF2Q03403 129 aa16.47■□□□□ 0.23
ABCD4-224ENST00000556119 RASGRF1Q13972 1273 aa16.47■□□□□ 0.23
ABCD4-224ENST00000556119 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 ADORA1P30542 326 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
ABCD4-224ENST00000556119 TMEM31Q5JXX7 168 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 OLFML2BQ68BL8 750 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
ABCD4-224ENST00000556119 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 SNX27Q96L92 541 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 DNAJC18Q9H819 358 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 TMEM39AQ9NV64 488 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 PHF24Q9UPV7 400 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
ABCD4-224ENST00000556119 ZNFX1Q9P2E3 1918 aaKnown RBP16.46■□□□□ 0.23
ABCD4-224ENST00000556119 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-224ENST00000556119 KCNQ1P51787 676 aa16.45■□□□□ 0.22
ABCD4-224ENST00000556119 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
ABCD4-224ENST00000556119 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
ABCD4-224ENST00000556119 CEP126Q9P2H0 1117 aa16.45■□□□□ 0.22
ABCD4-224ENST00000556119 PQBP1O60828 265 aaKnown RBP16.44■□□□□ 0.22
ABCD4-224ENST00000556119 GDF11O95390 407 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 FAAP100Q0VG06 881 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
ABCD4-224ENST00000556119 FAM47AQ5JRC9 791 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 DPP9Q86TI2 863 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 SIL1Q9H173 461 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 C11orf16Q9NQ32 467 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 ZBTB21Q9ULJ3 1066 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 ZNF236Q9UL36 1845 aa16.44■□□□□ 0.22
ABCD4-224ENST00000556119 PDS5AQ29RF7 1337 aaKnown RBP16.44■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 TMEM240Q5SV17 173 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
ABCD4-224ENST00000556119 SLC44A5Q8NCS7 719 aa16.43■□□□□ 0.22
ABCD4-224ENST00000556119 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-224ENST00000556119 PRRC2BQ5JSZ5 2229 aaKnown RBP16.43■□□□□ 0.22
ABCD4-224ENST00000556119 GPR37L1O60883 481 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 COBLO75128 1261 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 TIMP1P01033 207 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 ADORA2AP29274 412 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 LBX2Q6XYB7 198 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
ABCD4-224ENST00000556119 C12orf42Q96LP6 360 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-224ENST00000556119 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
ABCD4-224ENST00000556119 CIAO1O76071 339 aa16.41■□□□□ 0.22
ABCD4-224ENST00000556119 LDHCP07864 332 aa16.41■□□□□ 0.22
ABCD4-224ENST00000556119 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
ABCD4-224ENST00000556119 FOXP4Q8IVH2 680 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-224ENST00000556119 KHSRPQ92945 711 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCD4-224ENST00000556119 TOX2Q96NM4 488 aa16.41■□□□□ 0.22
ABCD4-224ENST00000556119 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
ABCD4-224ENST00000556119 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
ABCD4-224ENST00000556119 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
ABCD4-224ENST00000556119 A0A1W2PQ45 241 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-224ENST00000556119 A0A1W2PQY0 241 aa16.4■□□□□ 0.22
ABCD4-224ENST00000556119 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
ABCD4-224ENST00000556119 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
ABCD4-224ENST00000556119 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
ABCD4-224ENST00000556119 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-224ENST00000556119 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
ABCD4-224ENST00000556119 SPDYE16A6NNV3 312 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-224ENST00000556119 STRNO43815 780 aa16.39■□□□□ 0.21
ABCD4-224ENST00000556119 PGK1P00558 417 aa16.39■□□□□ 0.21
ABCD4-224ENST00000556119 TIMM10P62072 90 aa16.39■□□□□ 0.21
ABCD4-224ENST00000556119 GSTO1P78417 241 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms