RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
PNN-203ENST00000554117 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 ANTXR1Q9H6X2 564 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
PNN-203ENST00000554117 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 TATDN1Q6P1N9 297 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 ATP8A2Q9NTI2 1148 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 MORF4L1Q9UBU8 362 aa12.96□□□□□ -0.33
PNN-203ENST00000554117 RGS2P41220 211 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 ERVK-24P63145 666 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 BOLA2Q9H3K6 86 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 RLFQ13129 1914 aa12.95□□□□□ -0.34
PNN-203ENST00000554117 RPTORQ8N122 1335 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 MYH6P13533 1939 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
PNN-203ENST00000554117 ATP5JP18859 108 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
PNN-203ENST00000554117 NECAB2Q7Z6G3 386 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 C12orf42Q96LP6 360 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 P2RX7Q99572 595 aaKnown RBP12.94□□□□□ -0.34
PNN-203ENST00000554117 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
PNN-203ENST00000554117 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.348e-10■□□□□ 9
PNN-203ENST00000554117 RABGAP1Q9Y3P9 1069 aa12.94□□□□□ -0.34
PNN-203ENST00000554117 EVI5O60447 810 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 CYP2B6P20813 491 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 HAUS7Q99871 368 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 KIAA1683Q9H0B3 1180 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
PNN-203ENST00000554117 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
PNN-203ENST00000554117 MBD4O95243 580 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 XRCC5P13010 732 aaKnown RBP12.92□□□□□ -0.34
PNN-203ENST00000554117 ADD2P35612 726 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
PNN-203ENST00000554117 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 ARMT1Q9H993 441 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
PNN-203ENST00000554117 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 HOXC10Q9NYD6 342 aa12.92□□□□□ -0.34
PNN-203ENST00000554117 ERC2O15083 957 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 VCAM1P19320 739 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 SHMT1P34896 483 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 PLCD1P51178 756 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 UBE3CQ15386 1083 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 LPAR1Q92633 364 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 SHISA4Q96DD7 197 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 APBA2Q99767 749 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 RPAP3Q9H6T3 665 aaPredicted RBP12.91□□□□□ -0.34
PNN-203ENST00000554117 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
PNN-203ENST00000554117 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 ARPP21Q9UBL0 812 aaPredicted RBP12.91□□□□□ -0.34
PNN-203ENST00000554117 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 BRCA2P51587 3418 aa12.91□□□□□ -0.34
PNN-203ENST00000554117 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
PNN-203ENST00000554117 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 COG2Q14746 738 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 SEPT2Q15019 361 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
PNN-203ENST00000554117 MCM3APO60318 1980 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 H0YGN5 161 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 RAD21O60216 631 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
PNN-203ENST00000554117 GNAT2P19087 354 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 ICA1Q05084 483 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 PLS1Q14651 629 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 DPP9Q86TI2 863 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
PNN-203ENST00000554117 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 RBPJLQ9UBG7 517 aa12.89□□□□□ -0.35
PNN-203ENST00000554117 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
PNN-203ENST00000554117 SLC15A5A6NIM6 579 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 MSCO60682 206 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 APPP05067 770 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 SLC3A2P08195 630 aaKnown RBP12.88□□□□□ -0.35
PNN-203ENST00000554117 JAG1P78504 1218 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 GABPAQ06546 454 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms