RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 IGSF3O75054 1194 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 HMGCS2P54868 508 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 BADQ92934 168 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 PIH1D3Q9NQM4 214 aaKnown RBP18.79■□□□□ 0.6
BRF1-220ENST00000552127 NCOR1O75376 2440 aa18.79■□□□□ 0.6
BRF1-220ENST00000552127 GRIN2CQ14957 1233 aa18.78■□□□□ 0.6
BRF1-220ENST00000552127 TEX11Q8IYF3 940 aa18.78■□□□□ 0.6
BRF1-220ENST00000552127 ZNF280CQ8ND82 737 aa18.78■□□□□ 0.6
BRF1-220ENST00000552127 USP6NLQ92738 828 aa18.78■□□□□ 0.6
BRF1-220ENST00000552127 ATP11BQ9Y2G3 1177 aa18.78■□□□□ 0.6
BRF1-220ENST00000552127 RLFQ13129 1914 aa18.77■□□□□ 0.6
BRF1-220ENST00000552127 APBB1O00213 710 aa18.77■□□□□ 0.6
BRF1-220ENST00000552127 CLASRPQ8N2M8 674 aaKnown RBP18.77■□□□□ 0.6
BRF1-220ENST00000552127 ADAMTS19Q8TE59 1207 aa18.77■□□□□ 0.6
BRF1-220ENST00000552127 SH3RF3Q8TEJ3 882 aaPredicted RBP18.77■□□□□ 0.6
BRF1-220ENST00000552127 TXNRD2Q9NNW7 524 aa18.77■□□□□ 0.6
BRF1-220ENST00000552127 PRDM5Q9NQX1 630 aaPredicted RBP18.77■□□□□ 0.6
BRF1-220ENST00000552127 AATFQ9NY61 560 aaKnown RBP eCLIP18.77■□□□□ 0.6
BRF1-220ENST00000552127 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
BRF1-220ENST00000552127 BAG3O95817 575 aa18.76■□□□□ 0.59
BRF1-220ENST00000552127 PLCG2P16885 1265 aa18.76■□□□□ 0.59
BRF1-220ENST00000552127 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
BRF1-220ENST00000552127 GPRC5AQ8NFJ5 357 aa18.76■□□□□ 0.59
BRF1-220ENST00000552127 ATXN2LQ8WWM7 1075 aaKnown RBP18.76■□□□□ 0.59
BRF1-220ENST00000552127 OSBPL5Q9H0X9 879 aaPredicted RBP18.76■□□□□ 0.59
BRF1-220ENST00000552127 RGS2P41220 211 aa18.75■□□□□ 0.59
BRF1-220ENST00000552127 ASB2Q96Q27 587 aa18.75■□□□□ 0.59
BRF1-220ENST00000552127 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
BRF1-220ENST00000552127 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
BRF1-220ENST00000552127 FAM196BA6NMK8 535 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 DNM1LO00429 736 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 IDH1O75874 414 aaKnown RBP18.74■□□□□ 0.59
BRF1-220ENST00000552127 MAPK4P31152 587 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 PPP4CP60510 307 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 IRX3P78415 501 aaPredicted RBP18.74■□□□□ 0.59
BRF1-220ENST00000552127 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 MORN1Q5T089 497 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 UHRF1Q96T88 793 aaPredicted RBP18.74■□□□□ 0.59
BRF1-220ENST00000552127 APBA2Q99767 749 aa18.74■□□□□ 0.59
BRF1-220ENST00000552127 DDX20Q9UHI6 824 aaKnown RBP18.74■□□□□ 0.59
BRF1-220ENST00000552127 MYH8P13535 1937 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 TBC1D12O60347 775 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 IFIT2P09913 472 aaKnown RBP18.73■□□□□ 0.59
BRF1-220ENST00000552127 GPR142Q7Z601 462 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 PPM1EQ8WY54 764 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 LPAR1Q92633 364 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 PORCNQ9H237 461 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 SYNGAP1Q96PV0 1343 aa18.73■□□□□ 0.59
BRF1-220ENST00000552127 CYP7A1P22680 504 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 Q3C1V9 767 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 TMED8Q6PL24 325 aaPredicted RBP18.72■□□□□ 0.59
BRF1-220ENST00000552127 SLC39A5Q6ZMH5 540 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 MAGEB6Q8N7X4 407 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.72■□□□□ 0.59
BRF1-220ENST00000552127 RNPC3Q96LT9 517 aaKnown RBP18.72■□□□□ 0.59
BRF1-220ENST00000552127 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.72■□□□□ 0.59
BRF1-220ENST00000552127 THEGQ9P2T0 379 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 FLT1P17948 1338 aa18.72■□□□□ 0.59
BRF1-220ENST00000552127 CNGA1P29973 690 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 HERVK_113P62684 666 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 SH3RF1Q7Z6J0 888 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 PLEKHH3Q7Z736 793 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 CCAR1Q8IX12 1150 aaKnown RBP18.71■□□□□ 0.59
BRF1-220ENST00000552127 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 PDLIM7Q9NR12 457 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 FLRT1Q9NZU1 646 aa18.71■□□□□ 0.59
BRF1-220ENST00000552127 TRIM43BA6NCK2 446 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 MSCO60682 206 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 DNAJB2P25686 324 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 HOXA7P31268 230 aaPredicted RBP18.7■□□□□ 0.58
BRF1-220ENST00000552127 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 ERVK-24P63145 666 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
BRF1-220ENST00000552127 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
BRF1-220ENST00000552127 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 MFSD14CQ5VZR4 134 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 CERS3Q8IU89 383 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 TRIM43Q96BQ3 446 aaPredicted RBP18.7■□□□□ 0.58
BRF1-220ENST00000552127 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
BRF1-220ENST00000552127 ZNF576Q9H609 170 aa18.7■□□□□ 0.58
BRF1-220ENST00000552127 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 MRPS5P82675 430 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
BRF1-220ENST00000552127 MTMR2Q13614 643 aa18.69■□□□□ 0.58
BRF1-220ENST00000552127 RRP1BQ14684 758 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
BRF1-220ENST00000552127 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 YTHDC1Q96MU7 727 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
BRF1-220ENST00000552127 C1QTNF1Q9BXJ1 281 aa18.69■□□□□ 0.58
BRF1-220ENST00000552127 LRRCC1Q9C099 1032 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms