RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GPR75-ASB3A0A0A6YYF3 556 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 SGPL1O95470 568 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 HOXD10P28358 340 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 MTMR2Q13614 643 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 ZYXQ15942 572 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 AMHR2Q16671 573 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 TMEM57Q8N5G2 664 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 TGFBRAP1Q8WUH2 860 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 P2RX7Q99572 595 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 API5Q9BZZ5 524 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 CCDC8Q9H0W5 538 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 ASCC2Q9H1I8 757 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 TXNRD2Q9NNW7 524 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 ZCCHC17Q9NP64 241 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 PIH1D3Q9NQM4 214 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 LRP2BPQ9P2M1 347 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 PALD1Q9ULE6 856 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 PTPRFP10586 1907 aa8.44□□□□□ -1.06
PRPF40B-214ENST00000551320 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 MYO5AQ9Y4I1 1855 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 ARHGAP33O14559 1287 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 CTNND1O60716 968 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 CYP2B6P20813 491 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 ZAP70P43403 619 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 UBXN2AP68543 259 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 CCL14Q16627 93 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 Q3C1V9 767 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 Q7L0L9 218 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 FASTKD5Q7L8L6 764 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 C7orf61Q8IZ16 206 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 MIGA1Q8NAN2 632 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 HS3ST6Q96QI5 342 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 AGTPBP1Q9UPW5 1226 aa8.43□□□□□ -1.06
PRPF40B-214ENST00000551320 ALPK3Q96L96 1907 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 SMIM22K7EJ46 135 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 GNRH1P01148 92 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 RLBP1P12271 317 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 CAP2P40123 477 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 G3BP1Q13283 466 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 MVPQ14764 893 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 ZNF280CQ8ND82 737 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 TRIB2Q92519 343 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 PAGR1Q9BTK6 254 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 PORCNQ9H237 461 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 ANTXR1Q9H6X2 564 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 GJD2Q9UKL4 321 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 SIPA1L1O43166 1804 aa8.42□□□□□ -1.06
PRPF40B-214ENST00000551320 CUL9Q8IWT3 2517 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 APBB1O00213 710 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 OATP04181 439 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 GNAI2P04899 355 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 CCND3P30281 292 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 PRMT2P55345 433 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 TNNI3KQ59H18 835 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 TTC39AQ5SRH9 613 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 NAA16Q6N069 864 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 PRO3102Q9H379 93 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 FPGT-TNNI3KV9GXZ4 949 aa8.41□□□□□ -1.06
PRPF40B-214ENST00000551320 ATAD5Q96QE3 1844 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 FLT1P17948 1338 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 SURF6O75683 361 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 CHGBP05060 677 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 GNAI3P08754 354 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 CYP7A1P22680 504 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 PBX2P40425 430 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 ZGPATQ8N5A5 531 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 COA7Q96BR5 231 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 PAK6Q9NQU5 681 aaPredicted RBP8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 RBPJLQ9UBG7 517 aa8.4□□□□□ -1.06
PRPF40B-214ENST00000551320 PLXNB2O15031 1838 aa8.4□□□□□ -1.07
PRPF40B-214ENST00000551320 UNC80Q8N2C7 3258 aa8.4□□□□□ -1.07
PRPF40B-214ENST00000551320 EYSQ5T1H1 3165 aa8.4□□□□□ -1.07
PRPF40B-214ENST00000551320 C3orf80F5H4A9 247 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms