RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 RIN3Q8TB24 985 aa8.82□□□□□ -1
COPA-206ENST00000545266 VWCEQ96DN2 955 aa8.82□□□□□ -1
COPA-206ENST00000545266 IGF2BP3O00425 579 aaKnown RBP eCLIP8.81□□□□□ -1
COPA-206ENST00000545266 FAM87AP0C7U9 286 aa8.81□□□□□ -1
COPA-206ENST00000545266 RAG1P15918 1043 aa8.81□□□□□ -1
COPA-206ENST00000545266 TNNI3KQ59H18 835 aa8.81□□□□□ -1
COPA-206ENST00000545266 C22orf34Q6ZV56 151 aa8.81□□□□□ -1
COPA-206ENST00000545266 ZDHHC13Q8IUH4 622 aa8.81□□□□□ -1
COPA-206ENST00000545266 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
COPA-206ENST00000545266 MFSD14AQ96MC6 490 aa8.81□□□□□ -1
COPA-206ENST00000545266 KIF2CQ99661 725 aa8.81□□□□□ -1
COPA-206ENST00000545266 A0A1W2PQH9 124 aa8.8□□□□□ -1
COPA-206ENST00000545266 FAM170BA6NMN3 283 aa8.8□□□□□ -1
COPA-206ENST00000545266 KLF4O43474 513 aa8.8□□□□□ -1
COPA-206ENST00000545266 CYP27C1Q4G0S4 372 aa8.8□□□□□ -1
COPA-206ENST00000545266 BAHD1Q8TBE0 780 aaPredicted RBP8.8□□□□□ -1
COPA-206ENST00000545266 COX4I2Q96KJ9 171 aa8.8□□□□□ -1
COPA-206ENST00000545266 MIPEPQ99797 713 aa8.8□□□□□ -1
COPA-206ENST00000545266 MRVI1Q9Y6F6 885 aa8.8□□□□□ -1
COPA-206ENST00000545266 ETV3P41162 512 aa8.79□□□□□ -1
COPA-206ENST00000545266 ZNF746Q6NUN9 644 aaPredicted RBP8.79□□□□□ -1
COPA-206ENST00000545266 UNC5AQ6ZN44 842 aa8.79□□□□□ -1
COPA-206ENST00000545266 ZNF765Q7L2R6 523 aa8.79□□□□□ -1
COPA-206ENST00000545266 TTC6Q86TZ1 520 aa8.79□□□□□ -1
COPA-206ENST00000545266 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
COPA-206ENST00000545266 HEXIM2Q96MH2 286 aaKnown RBP8.79□□□□□ -1
COPA-206ENST00000545266 METTL22Q9BUU2 404 aaPredicted RBP8.79□□□□□ -1
COPA-206ENST00000545266 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.79□□□□□ -1
COPA-206ENST00000545266 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
COPA-206ENST00000545266 PRR19A6NJB7 356 aa8.78□□□□□ -1
COPA-206ENST00000545266 SMAD7O15105 426 aaKnown RBP8.78□□□□□ -1
COPA-206ENST00000545266 FURINP09958 794 aa8.78□□□□□ -1
COPA-206ENST00000545266 POLR2BP30876 1174 aaKnown RBP8.78□□□□□ -1
COPA-206ENST00000545266 NBPF6Q5VWK0 638 aa8.78□□□□□ -1
COPA-206ENST00000545266 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
COPA-206ENST00000545266 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
COPA-206ENST00000545266 UBXN4Q92575 508 aa8.78□□□□□ -1
COPA-206ENST00000545266 NBPF4Q96M43 638 aa8.78□□□□□ -1
COPA-206ENST00000545266 FBXL18Q96ME1 805 aa8.78□□□□□ -1
COPA-206ENST00000545266 HIRIP3Q9BW71 556 aaPredicted RBP8.78□□□□□ -1
COPA-206ENST00000545266 TNKS2Q9H2K2 1166 aa8.78□□□□□ -1
COPA-206ENST00000545266 MKNK2Q9HBH9 465 aa8.78□□□□□ -1
COPA-206ENST00000545266 MAPK8IP1Q9UQF2 711 aa8.78□□□□□ -1
COPA-206ENST00000545266 SLC12A7Q9Y666 1083 aa8.78□□□□□ -1
COPA-206ENST00000545266 LTBP3Q9NS15 1303 aa8.78□□□□□ -1
COPA-206ENST00000545266 ITGB7P26010 798 aa8.77□□□□□ -1.01
COPA-206ENST00000545266 ZYXQ15942 572 aaKnown RBP8.77□□□□□ -1.01
COPA-206ENST00000545266 DUSP27Q5VZP5 1158 aa8.77□□□□□ -1.01
COPA-206ENST00000545266 TMEM192Q8IY95 271 aa8.77□□□□□ -1.01
COPA-206ENST00000545266 FBXL6Q8N531 539 aa8.77□□□□□ -1.01
COPA-206ENST00000545266 DHX38Q92620 1227 aaKnown RBP8.77□□□□□ -1.01
COPA-206ENST00000545266 DHRS1Q96LJ7 313 aa8.77□□□□□ -1.01
COPA-206ENST00000545266 WDR64B1ANS9 1081 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 STK10O94804 968 aaKnown RBP8.76□□□□□ -1.01
COPA-206ENST00000545266 ZNF865P0CJ78 1059 aaPredicted RBP8.76□□□□□ -1.01
COPA-206ENST00000545266 PRSS36Q5K4E3 855 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 CDH24Q86UP0 819 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 RNF141Q8WVD5 230 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 KREMEN1Q96MU8 473 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 ATG3Q9NT62 314 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 SUCOQ9UBS9 1254 aaKnown RBP8.76□□□□□ -1.01
COPA-206ENST00000545266 GTF2IRD1Q9UHL9 959 aa8.76□□□□□ -1.01
COPA-206ENST00000545266 ZNF214Q9UL59 606 aaPredicted RBP8.76□□□□□ -1.01
COPA-206ENST00000545266 GBP1P32455 592 aa8.75□□□□□ -1.01
COPA-206ENST00000545266 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
COPA-206ENST00000545266 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
COPA-206ENST00000545266 ANKS3Q6ZW76 656 aa8.75□□□□□ -1.01
COPA-206ENST00000545266 ASPNQ9BXN1 380 aa8.75□□□□□ -1.01
COPA-206ENST00000545266 SEMA6BQ9H3T3 888 aa8.75□□□□□ -1.01
COPA-206ENST00000545266 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
COPA-206ENST00000545266 PRDM5Q9NQX1 630 aaPredicted RBP8.75□□□□□ -1.01
COPA-206ENST00000545266 CYP7A1P22680 504 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 OXCT1P55809 520 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 NBPF12Q5TAG4 269 aaPredicted RBP8.74□□□□□ -1.01
COPA-206ENST00000545266 SOGA3Q5TF21 947 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 SLC6A18Q96N87 628 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 OSBPL1AQ9BXW6 950 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 ACTR10Q9NZ32 417 aa8.74□□□□□ -1.01
COPA-206ENST00000545266 CLEC3AO75596 197 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 RAB33AQ14088 237 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 SFRP5Q5T4F7 317 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 CKAP2LQ8IYA6 745 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 U3KQE9 123 aa8.73□□□□□ -1.01
COPA-206ENST00000545266 FOSL1P15407 271 aa8.72□□□□□ -1.01
COPA-206ENST00000545266 RNF4P78317 190 aa8.72□□□□□ -1.01
COPA-206ENST00000545266 SERINC3Q13530 473 aa8.72□□□□□ -1.01
COPA-206ENST00000545266 BBS9Q3SYG4 887 aa8.72□□□□□ -1.01
COPA-206ENST00000545266 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
COPA-206ENST00000545266 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
COPA-206ENST00000545266 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
COPA-206ENST00000545266 CAPN6Q9Y6Q1 641 aa8.72□□□□□ -1.01
COPA-206ENST00000545266 ANKRD39Q53RE8 183 aa8.71□□□□□ -1.02
COPA-206ENST00000545266 PIWIL2Q8TC59 973 aaKnown RBP8.71□□□□□ -1.02
COPA-206ENST00000545266 KLHL6Q8WZ60 621 aa8.71□□□□□ -1.02
COPA-206ENST00000545266 Q96M66 194 aa8.71□□□□□ -1.02
COPA-206ENST00000545266 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
COPA-206ENST00000545266 K7ELQ4 463 aaPredicted RBP8.7□□□□□ -1.02
COPA-206ENST00000545266 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms