RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 NCAPHQ15003 741 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
LEMD3-206ENST00000545026 ARMCX6Q7L4S7 300 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 DZIP1LQ8IYY4 767 aaKnown RBP9.44□□□□□ -0.9
LEMD3-206ENST00000545026 FBLIM1Q8WUP2 373 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 KLHL6Q8WZ60 621 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 SEMA6CQ9H3T2 930 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 NFICP08651 508 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 GBP1P32455 592 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 PMS1P54277 932 aaKnown RBP9.43□□□□□ -0.9
LEMD3-206ENST00000545026 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 XAGE3Q8WTP9 111 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 EZH1Q92800 747 aaPredicted RBP9.43□□□□□ -0.9
LEMD3-206ENST00000545026 DHRS1Q96LJ7 313 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 SLC6A18Q96N87 628 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
LEMD3-206ENST00000545026 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 IFRD2Q12894 506 aaPredicted RBP9.42□□□□□ -0.9
LEMD3-206ENST00000545026 UVSSAQ2YD98 709 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 GNPTABQ3T906 1256 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 KIAA1211LQ6NV74 962 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
LEMD3-206ENST00000545026 MFSD2AQ8NA29 543 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 PSMG3-AS1Q96PY0 264 aa9.42□□□□□ -0.9
LEMD3-206ENST00000545026 SUCOQ9UBS9 1254 aaKnown RBP9.42□□□□□ -0.9
LEMD3-206ENST00000545026 KRBA1A5PL33 1030 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 DYNC1LI2O43237 492 aaPredicted RBP9.41□□□□□ -0.9
LEMD3-206ENST00000545026 SEZ6L2Q6UXD5 910 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 ARMC10Q8N2F6 343 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 ST13P5Q8NFI4 369 aaPredicted RBP9.41□□□□□ -0.9
LEMD3-206ENST00000545026 DNAJB8Q8NHS0 232 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 MYRFLQ96LU7 910 aa9.41□□□□□ -0.9
LEMD3-206ENST00000545026 BMP3P12645 472 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 BBS9Q3SYG4 887 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 MTERF2Q49AM1 385 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 YIPF2Q9BWQ6 316 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.4□□□□□ -0.9
LEMD3-206ENST00000545026 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 CEP131Q9UPN4 1083 aa9.4□□□□□ -0.9
LEMD3-206ENST00000545026 COL17A1Q9UMD9 1497 aaPredicted RBP9.4□□□□□ -0.91
LEMD3-206ENST00000545026 C9IYK1 514 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 CLEC3AO75596 197 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 MAP7Q14244 749 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 EGFLAMQ63HQ2 1017 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 SPATC1Q76KD6 591 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 EEPD1Q7L9B9 569 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 SH3TC2Q8TF17 1288 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 UTP4Q969X6 686 aaKnown RBP9.39□□□□□ -0.91
LEMD3-206ENST00000545026 ZNF669Q96BR6 464 aaPredicted RBP9.39□□□□□ -0.91
LEMD3-206ENST00000545026 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
LEMD3-206ENST00000545026 SUSD5O60279 629 aa9.38□□□□□ -0.91
LEMD3-206ENST00000545026 SLITRK5O94991 958 aa9.38□□□□□ -0.91
LEMD3-206ENST00000545026 MAP4P27816 1152 aaKnown RBP9.38□□□□□ -0.91
LEMD3-206ENST00000545026 TDRD10Q5VZ19 366 aaKnown RBP9.38□□□□□ -0.91
LEMD3-206ENST00000545026 LETMD1Q6P1Q0 360 aa9.38□□□□□ -0.91
LEMD3-206ENST00000545026 FAM20CQ8IXL6 584 aa9.38□□□□□ -0.91
LEMD3-206ENST00000545026 MIPEPQ99797 713 aa9.38□□□□□ -0.91
LEMD3-206ENST00000545026 ENPP3O14638 875 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
LEMD3-206ENST00000545026 TP53P04637 393 aaPredicted RBP9.37□□□□□ -0.91
LEMD3-206ENST00000545026 SLC10A6Q3KNW5 377 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 ZNF662Q6ZS27 426 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 JMYQ8N9B5 988 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 PFDN2Q9UHV9 154 aa9.37□□□□□ -0.91
LEMD3-206ENST00000545026 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 HSD3B2P26439 372 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 RXRBP28702 533 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 AXDND1Q5T1B0 1012 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-206ENST00000545026 NBPF12Q5TAG4 269 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-206ENST00000545026 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-206ENST00000545026 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-206ENST00000545026 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
LEMD3-206ENST00000545026 EPN3Q9H201 632 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 PRDM10Q9NQV6 1147 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 FAM86C1Q9NVL1 165 aa9.36□□□□□ -0.91
LEMD3-206ENST00000545026 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 CHRNA4P43681 627 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 SSRP1Q08945 709 aaKnown RBP9.35□□□□□ -0.91
LEMD3-206ENST00000545026 CDK5R2Q13319 367 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 KREMEN1Q96MU8 473 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 HAUS7Q99871 368 aa9.35□□□□□ -0.91
LEMD3-206ENST00000545026 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
LEMD3-206ENST00000545026 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
LEMD3-206ENST00000545026 C2orf27AQ580R0 203 aa9.34□□□□□ -0.91
LEMD3-206ENST00000545026 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
LEMD3-206ENST00000545026 CD163Q86VB7 1156 aa9.34□□□□□ -0.91
LEMD3-206ENST00000545026 THAP3Q8WTV1 239 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms