RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 STX8Q9UNK0 236 aa27.22■■□□□ 1.95
PCMT1-211ENST00000544496 DDTLA6NHG4 134 aaPredicted RBP27.21■■□□□ 1.95
PCMT1-211ENST00000544496 SHMT1P34896 483 aa27.21■■□□□ 1.95
PCMT1-211ENST00000544496 NOVP48745 357 aa27.21■■□□□ 1.95
PCMT1-211ENST00000544496 FAM83AQ86UY5 434 aa27.21■■□□□ 1.95
PCMT1-211ENST00000544496 TOP1P11387 765 aaKnown RBP27.2■■□□□ 1.95
PCMT1-211ENST00000544496 GNAQP50148 359 aa27.2■■□□□ 1.95
PCMT1-211ENST00000544496 AKAP17AQ02040 695 aaKnown RBP27.2■■□□□ 1.95
PCMT1-211ENST00000544496 CSPP1Q1MSJ5 1256 aa27.2■■□□□ 1.95
PCMT1-211ENST00000544496 RNF26Q9BY78 433 aaPredicted RBP27.2■■□□□ 1.95
PCMT1-211ENST00000544496 DEXIO95424 95 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 PRELPP51888 382 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 ALG1Q9BT22 464 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 SLC26A6Q9BXS9 759 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 HERC5Q9UII4 1024 aaKnown RBP27.19■■□□□ 1.94
PCMT1-211ENST00000544496 CLRN2A0PK11 232 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 TNNI2P48788 182 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 GMPSP49915 693 aaPredicted RBP27.19■■□□□ 1.94
PCMT1-211ENST00000544496 TRIM29Q14134 588 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 SH3BP5LQ7L8J4 393 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 FBXO18Q8NFZ0 1043 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 PHKBQ93100 1093 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 TMEM47Q9BQJ4 181 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 GJA3Q9Y6H8 435 aa27.19■■□□□ 1.94
PCMT1-211ENST00000544496 TCP10L2B9ZVM9 353 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 WNT10BO00744 389 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 TNFAIP1Q13829 316 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 CEP95Q96GE4 821 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 CSRNP1Q96S65 589 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 MTMR4Q9NYA4 1195 aa27.18■■□□□ 1.94
PCMT1-211ENST00000544496 RBM27Q9P2N5 1060 aaKnown RBP27.18■■□□□ 1.94
PCMT1-211ENST00000544496 TATDN1Q6P1N9 297 aa27.17■■□□□ 1.94
PCMT1-211ENST00000544496 TMTC3Q6ZXV5 915 aa27.17■■□□□ 1.94
PCMT1-211ENST00000544496 VEZTQ9HBM0 779 aa27.17■■□□□ 1.94
PCMT1-211ENST00000544496 IGKV6D-41A0A0C4DH26 115 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 AKR1B1P15121 316 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 CERKLQ49MI3 558 aaPredicted RBP27.16■■□□□ 1.94
PCMT1-211ENST00000544496 NBPF11Q86T75 865 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 MICALL2Q8IY33 904 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 LZTS2Q9BRK4 669 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 CNOT7Q9UIV1 285 aaKnown RBP27.16■■□□□ 1.94
PCMT1-211ENST00000544496 H7C1D1 291 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 PPFIA3O75145 1194 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 TTLL1O95922 423 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 XBP1P17861 261 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 GRM4Q14833 912 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 FERMT3Q86UX7 667 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 GPC2Q8N158 579 aa27.16■■□□□ 1.94
PCMT1-211ENST00000544496 MYH8P13535 1937 aa27.15■■□□□ 1.94
PCMT1-211ENST00000544496 PRPF3O43395 683 aaKnown RBP27.15■■□□□ 1.94
PCMT1-211ENST00000544496 KRT85P78386 507 aa27.15■■□□□ 1.94
PCMT1-211ENST00000544496 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.15■■□□□ 1.94
PCMT1-211ENST00000544496 RESTQ13127 1097 aa27.14■■□□□ 1.94
PCMT1-211ENST00000544496 ATL3Q6DD88 541 aa27.14■■□□□ 1.94
PCMT1-211ENST00000544496 DNAJC18Q9H819 358 aa27.14■■□□□ 1.94
PCMT1-211ENST00000544496 MPHOSPH10O00566 681 aaKnown RBP27.13■■□□□ 1.93
PCMT1-211ENST00000544496 TRAK2O60296 914 aa27.13■■□□□ 1.93
PCMT1-211ENST00000544496 NBPF9Q3BBW0 867 aa27.13■■□□□ 1.93
PCMT1-211ENST00000544496 KANSL2Q9H9L4 492 aa27.13■■□□□ 1.93
PCMT1-211ENST00000544496 ZNF541Q9H0D2 1346 aa27.13■■□□□ 1.93
PCMT1-211ENST00000544496 TBC1D12O60347 775 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 TMEM179Q6ZVK1 233 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 TMEM87AQ8NBN3 555 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 LMBRD1Q9NUN5 540 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 CNTNAP1P78357 1384 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 DICER1Q9UPY3 1922 aaKnown RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 PRPF40AO75400 957 aaKnown RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 NCLP19338 710 aaKnown RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 FUT2Q10981 343 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 FOXD4L6Q3SYB3 417 aaPredicted RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 FOXD4L3Q6VB84 417 aaPredicted RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 BRAPQ7Z569 592 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 CCDC82Q8N4S0 544 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 SCAND2PQ9GZW5 306 aaPredicted RBP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.12■■□□□ 1.93
PCMT1-211ENST00000544496 CFAP45Q9UL16 551 aa27.12■■□□□ 1.93
PCMT1-211ENST00000544496 FOSBP53539 338 aa27.11■■□□□ 1.93
PCMT1-211ENST00000544496 DNM1Q05193 864 aaKnown RBP27.11■■□□□ 1.93
PCMT1-211ENST00000544496 CABP5Q9NP86 173 aa27.11■■□□□ 1.93
PCMT1-211ENST00000544496 SIPA1L1O43166 1804 aa27.11■■□□□ 1.93
PCMT1-211ENST00000544496 PLEKHA8P1O95397 391 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 PARP1P09874 1014 aaKnown RBP27.1■■□□□ 1.93
PCMT1-211ENST00000544496 SMARCA1P28370 1054 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 GUCY1B3Q02153 619 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 SAFBQ15424 915 aaKnown RBP eCLIP27.1■■□□□ 1.93
PCMT1-211ENST00000544496 ABCB5Q2M3G0 1257 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 KIF4BQ2VIQ3 1234 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 RBM26Q5T8P6 1007 aaKnown RBP27.1■■□□□ 1.93
PCMT1-211ENST00000544496 KRT40Q6A162 431 aa27.1■■□□□ 1.93
PCMT1-211ENST00000544496 CMTR1Q8N1G2 835 aaKnown RBP27.09■■□□□ 1.93
PCMT1-211ENST00000544496 ZNF396Q96N95 335 aaPredicted RBP27.09■■□□□ 1.93
PCMT1-211ENST00000544496 NYAP2Q9P242 653 aa27.09■■□□□ 1.93
PCMT1-211ENST00000544496 CLIP2Q9UDT6 1046 aa27.09■■□□□ 1.93
PCMT1-211ENST00000544496 MAD2L2Q9UI95 211 aa27.09■■□□□ 1.93
PCMT1-211ENST00000544496 V9GY48 417 aaPredicted RBP27.09■■□□□ 1.93
PCMT1-211ENST00000544496 PALM3A6NDB9 673 aaPredicted RBP27.08■■□□□ 1.93
PCMT1-211ENST00000544496 SRBD1Q8N5C6 995 aaKnown RBP27.08■■□□□ 1.93
PCMT1-211ENST00000544496 GPRC5DQ9NZD1 345 aa27.08■■□□□ 1.93
PCMT1-211ENST00000544496 CNPY2Q9Y2B0 182 aa27.08■■□□□ 1.93
PCMT1-211ENST00000544496 CNTNAP5Q8WYK1 1306 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms