RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 TMEM47Q9BQJ4 181 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
XRCC1-202ENST00000543982 SLC12A7Q9Y666 1083 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 TBC1D12O60347 775 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 TROAPQ12815 778 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 PKP1Q13835 747 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 SEPT2Q15019 361 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 DGKHQ86XP1 1220 aa18.68■□□□□ 0.58
XRCC1-202ENST00000543982 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
XRCC1-202ENST00000543982 INTS4Q96HW7 963 aaKnown RBP18.68■□□□□ 0.58
XRCC1-202ENST00000543982 CIZ1Q9ULV3 898 aaPredicted RBP18.68■□□□□ 0.58
XRCC1-202ENST00000543982 PLIN4Q96Q06 1357 aa18.67■□□□□ 0.58
XRCC1-202ENST00000543982 ZBTB43O43298 467 aa18.67■□□□□ 0.58
XRCC1-202ENST00000543982 GH2P01242 217 aa18.67■□□□□ 0.58
XRCC1-202ENST00000543982 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
XRCC1-202ENST00000543982 CMTR1Q8N1G2 835 aaKnown RBP18.67■□□□□ 0.58
XRCC1-202ENST00000543982 TRIM34Q9BYJ4 488 aa18.67■□□□□ 0.58
XRCC1-202ENST00000543982 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
XRCC1-202ENST00000543982 UBE2Q2LH0YL09 131 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 USP50Q70EL3 339 aaPredicted RBP18.66■□□□□ 0.58
XRCC1-202ENST00000543982 CCDC84Q86UT8 332 aaPredicted RBP18.66■□□□□ 0.58
XRCC1-202ENST00000543982 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 NSUN7Q8NE18 718 aaKnown RBP18.66■□□□□ 0.58
XRCC1-202ENST00000543982 NUP133Q8WUM0 1156 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 SSC5DA1L4H1 1573 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 ABCB5Q2M3G0 1257 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 CCDC17Q96LX7 622 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 MTMR7Q9Y216 660 aa18.66■□□□□ 0.58
XRCC1-202ENST00000543982 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
XRCC1-202ENST00000543982 METAP2P50579 478 aaKnown RBP eCLIP18.65■□□□□ 0.58
XRCC1-202ENST00000543982 NTRK3Q16288 839 aa18.65■□□□□ 0.58
XRCC1-202ENST00000543982 USP48Q86UV5 1035 aa18.65■□□□□ 0.58
XRCC1-202ENST00000543982 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
XRCC1-202ENST00000543982 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.58
XRCC1-202ENST00000543982 FMR1Q06787 632 aaKnown RBP eCLIP18.64■□□□□ 0.58
XRCC1-202ENST00000543982 LRRC47Q8N1G4 583 aaKnown RBP18.64■□□□□ 0.58
XRCC1-202ENST00000543982 FANCBQ8NB91 859 aa18.64■□□□□ 0.58
XRCC1-202ENST00000543982 PNMA1Q8ND90 353 aa18.64■□□□□ 0.58
XRCC1-202ENST00000543982 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.58
XRCC1-202ENST00000543982 DDX11Q96FC9 970 aa18.64■□□□□ 0.58
XRCC1-202ENST00000543982 PITPNM2Q9BZ72 1349 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 GJB2P29033 226 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 INPP5BP32019 993 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 CAP2P40123 477 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 KRT26Q7Z3Y9 468 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 DCPSQ96C86 337 aaKnown RBP18.64■□□□□ 0.57
XRCC1-202ENST00000543982 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
XRCC1-202ENST00000543982 A0A1W2PRG0 241 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 EEF2P13639 858 aaKnown RBP18.63■□□□□ 0.57
XRCC1-202ENST00000543982 NT5C2P49902 561 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 PRKG1Q13976 671 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 RAB3GAP1Q15042 981 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 CATIPQ7Z7H3 387 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 STAG2Q8N3U4 1231 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 ANP32EQ9BTT0 268 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 GLIS2Q9BZE0 524 aaPredicted RBP18.63■□□□□ 0.57
XRCC1-202ENST00000543982 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
XRCC1-202ENST00000543982 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 IQCA1LA6NCM1 817 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 PLEKHA8P1O95397 391 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 ATP2B2Q01814 1243 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 PHKBQ93100 1093 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 SMC3Q9UQE7 1217 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 POLR2AP24928 1970 aaKnown RBP18.62■□□□□ 0.57
XRCC1-202ENST00000543982 WDR90Q96KV7 1748 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 TTLL1O95922 423 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
XRCC1-202ENST00000543982 FUT2Q10981 343 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 RTN1Q16799 776 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 TMEM179Q6ZVK1 233 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 ACER1Q8TDN7 264 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 ZBTB21Q9ULJ3 1066 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
XRCC1-202ENST00000543982 NID2Q14112 1375 aa18.62■□□□□ 0.57
XRCC1-202ENST00000543982 USP17L5A8MUK1 530 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 CCDC178Q5BJE1 867 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 SYNE3Q6ZMZ3 975 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 SULF1Q8IWU6 871 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
XRCC1-202ENST00000543982 TAOK2Q9UL54 1235 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 DDAH1O94760 285 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 GOLGA8HP0CJ92 632 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 ECE1P42892 770 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 KIAA1755Q5JYT7 1200 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
XRCC1-202ENST00000543982 USP17L2Q6R6M4 530 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
XRCC1-202ENST00000543982 CPVLQ9H3G5 476 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 ZNF112Q9UJU3 913 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 PPP2R3BQ9Y5P8 575 aa18.61■□□□□ 0.57
XRCC1-202ENST00000543982 GREB1LQ9C091 1923 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms