RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 HHIPL2Q6UWX4 724 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 LARGE2Q8N3Y3 721 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 COL4A5P29400 1685 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 CDKL5O76039 1030 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 IARSP41252 1262 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 CACNB3P54284 484 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 DMTNQ08495 405 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 MYH6P13533 1939 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 TGFB2P61812 414 aa17.67■□□□□ 0.42
CLPTM1-202ENST00000541297 BRCA1P38398 1863 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 RAD17O75943 681 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 TSPY3P0CV98 308 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 TSPY8P0CW00 308 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 PSMD1Q99460 953 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 MYH8P13535 1937 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 NFIAQ12857 509 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 IL17RBQ9NRM6 502 aa17.66■□□□□ 0.42
CLPTM1-202ENST00000541297 PSME4Q14997 1843 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 RIOK3O14730 519 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 CDK8P49336 464 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 KRT85P78386 507 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 ALG1Q9BT22 464 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 BAZ2BQ9UIF8 2168 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 RASA1P20936 1047 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 C16orf86Q6ZW13 317 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 NID2Q14112 1375 aa17.65■□□□□ 0.42
CLPTM1-202ENST00000541297 FKBP1AP62942 108 aaKnown RBP17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 RCSD1Q6JBY9 416 aa17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 FBXO18Q8NFZ0 1043 aa17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 ZDHHC15Q96MV8 337 aa17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 ZSCAN16Q9H4T2 348 aaPredicted RBP17.64■□□□□ 0.42
CLPTM1-202ENST00000541297 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
CLPTM1-202ENST00000541297 CEBPZQ03701 1054 aaKnown RBP17.64■□□□□ 0.41
CLPTM1-202ENST00000541297 TCP10Q12799 353 aa17.64■□□□□ 0.41
CLPTM1-202ENST00000541297 TROAPQ12815 778 aa17.64■□□□□ 0.41
CLPTM1-202ENST00000541297 CCDC192P0DO97 292 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 IFNAR1P17181 557 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 TPM3P06753 285 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 TTC6Q86TZ1 520 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 PSMD14O00487 310 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 FMNL1O95466 1100 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 PDCL2Q8N4E4 241 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 ZNF287Q9HBT7 754 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-202ENST00000541297 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 FER1L6Q2WGJ9 1857 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 hCG_1642624A0A1W2PR95 340 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 CAMK4Q16566 473 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 SERPINA10Q9UK55 444 aa17.62■□□□□ 0.41
CLPTM1-202ENST00000541297 RCAN1P53805 252 aa17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 SPATA32Q96LK8 384 aa17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 TDRD3Q9H7E2 651 aaKnown RBP17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 PTGS1P23219 599 aa17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
CLPTM1-202ENST00000541297 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 DDAH1O94760 285 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 PTGER2P43116 358 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 KRT40Q6A162 431 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 RSBN1LQ6PCB5 846 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 NIM1KQ8IY84 436 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 CALM1P0DP23 149 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 CALM2P0DP24 149 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 CALM3P0DP25 149 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 LUZP1Q86V48 1076 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 FAM200AQ8TCP9 573 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
CLPTM1-202ENST00000541297 LIG1P18858 919 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 LEO1Q8WVC0 666 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms