RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 NCOA5Q9HCD5 579 aaKnown RBP14.58□□□□□ -0.08
SMAD3-204ENST00000540846 SWAP70Q9UH65 585 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
SMAD3-204ENST00000540846 HPS5Q9UPZ3 1129 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 KIF3AQ9Y496 699 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 ADM5C9JUS6 153 aa14.57□□□□□ -0.08
SMAD3-204ENST00000540846 PRPF40AO75400 957 aaKnown RBP14.57□□□□□ -0.08
SMAD3-204ENST00000540846 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
SMAD3-204ENST00000540846 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
SMAD3-204ENST00000540846 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMAD3-204ENST00000540846 DDX49Q9Y6V7 483 aaKnown RBP14.57□□□□□ -0.08
SMAD3-204ENST00000540846 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
SMAD3-204ENST00000540846 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 NT5C2P49902 561 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 CCT2P78371 535 aaKnown RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 JAG1P78504 1218 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 SHROOM1Q2M3G4 852 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 EAPPQ56P03 285 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 ESR2Q92731 530 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 DCPSQ96C86 337 aaKnown RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 NID2Q14112 1375 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 PHIPQ8WWQ0 1821 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 IGKV6D-41A0A0C4DH26 115 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 MBD3O95983 291 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 LIFRP42702 1097 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 SEC23AQ15436 765 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 FAM47AQ5JRC9 791 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 CRACR2BQ8N4Y2 399 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 GZF1Q9H116 711 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-204ENST00000540846 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 ZNF287Q9HBT7 754 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 IL17RBQ9NRM6 502 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
SMAD3-204ENST00000540846 RANBP6O60518 1105 aaKnown RBP14.55□□□□□ -0.08
SMAD3-204ENST00000540846 NMT2O60551 498 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 AKR1B1P15121 316 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 NOVP48745 357 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 TMEM67Q5HYA8 995 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 RCSD1Q6JBY9 416 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 APOA5Q6Q788 366 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 SULF1Q8IWU6 871 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 FAM184AQ8NB25 1140 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 NEDD1Q8NHV4 660 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 GLIS2Q9BZE0 524 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-204ENST00000540846 MKNK2Q9HBH9 465 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
SMAD3-204ENST00000540846 TFAP4Q01664 338 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 MIGA2Q7L4E1 593 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 ENAHQ8N8S7 591 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-204ENST00000540846 ZKSCAN3Q9BRR0 538 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.54□□□□□ -0.081e-8■■■■□ 20.2
SMAD3-204ENST00000540846 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 TRPM7Q96QT4 1865 aa14.54□□□□□ -0.08
SMAD3-204ENST00000540846 TSPY2A6NKD2 308 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 IFIT3O14879 490 aaKnown RBP14.53□□□□□ -0.08
SMAD3-204ENST00000540846 GUCY1A2P33402 732 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 SART3Q15020 963 aaKnown RBP14.53□□□□□ -0.08
SMAD3-204ENST00000540846 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-204ENST00000540846 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-204ENST00000540846 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 ZNF444Q8N0Y2 327 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-204ENST00000540846 CDCA5Q96FF9 252 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 CCDC17Q96LX7 622 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 TNKSO95271 1327 aa14.53□□□□□ -0.08
SMAD3-204ENST00000540846 FSD2A1L4K1 749 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 METAP2P50579 478 aaKnown RBP eCLIP14.52□□□□□ -0.08
SMAD3-204ENST00000540846 RCAN1P53805 252 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 DNM1Q05193 864 aaKnown RBP14.52□□□□□ -0.08
SMAD3-204ENST00000540846 RESTQ13127 1097 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 CSPP1Q1MSJ5 1256 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 CERKLQ49MI3 558 aaPredicted RBP14.52□□□□□ -0.08
SMAD3-204ENST00000540846 MAP1SQ66K74 1059 aaPredicted RBP14.52□□□□□ -0.08
SMAD3-204ENST00000540846 RGS22Q8NE09 1264 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.08
SMAD3-204ENST00000540846 FZD1Q9UP38 647 aa14.52□□□□□ -0.08
SMAD3-204ENST00000540846 H3BQV1 296 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 ZBTB43O43298 467 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 GDF11O95390 407 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 TSPY3P0CV98 308 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 TSPY8P0CW00 308 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 FDPSP14324 419 aaKnown RBP14.51□□□□□ -0.09
SMAD3-204ENST00000540846 IFFO2Q5TF58 517 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 FERMT3Q86UX7 667 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 CLEC10AQ8IUN9 316 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 ANKS1AQ92625 1134 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 CEP95Q96GE4 821 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
SMAD3-204ENST00000540846 TRAF5O00463 557 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 KIF3CO14782 793 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms