RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 SUGP1Q8IWZ8 645 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 FBXL16Q8N461 479 aa14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 KCNH5Q8NCM2 988 aa14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 SELENOOQ9BVL4 669 aa14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 PUS3Q9BZE2 481 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 CAPN7Q9Y6W3 813 aa14.48□□□□□ -0.09
SFSWAP-209ENST00000540469 NDUFAB1O14561 156 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 BRD2P25440 801 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 UBXN1Q04323 297 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 NR5A1Q13285 461 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 MED15Q96RN5 788 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 GNL3LQ9NVN8 582 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 EPN1Q9Y6I3 576 aaPredicted RBP14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 FER1L4A9Z1Z3 1794 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 UBN2Q6ZU65 1347 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 ADORA1P30542 326 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 CCDC57Q2TAC2 916 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 CMTR1Q8N1G2 835 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 OTUD6BQ8N6M0 293 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 EHD4Q9H223 541 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 CENPHQ9H3R5 247 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 CXorf56Q9H5V9 222 aa14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 FBXO2Q9UK22 296 aaPredicted RBP14.47□□□□□ -0.09
SFSWAP-209ENST00000540469 SH2B2O14492 632 aaPredicted RBP14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 ZEB2O60315 1214 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 IRAK1P51617 712 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 TFR2Q9UP52 801 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 MAPK8IP1Q9UQF2 711 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 ATP1A1P05023 1023 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 IQCEQ6IPM2 695 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 ANKRD18AQ8IVF6 992 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 JAKMIP2Q96AA8 810 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 CHP1Q99653 195 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 SEC31BQ9NQW1 1179 aa14.46□□□□□ -0.09
SFSWAP-209ENST00000540469 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 HNRNPH1P31943 449 aaKnown RBP14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 TBC1D10CQ8IV04 446 aa14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 GIMAP7Q8NHV1 300 aa14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 XAGE2Q96GT9 111 aa14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.1
SFSWAP-209ENST00000540469 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 NDUFA10O95299 355 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 PPFIA1Q13136 1202 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 KRT31Q15323 416 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 PROSER2Q86WR7 435 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 EPSTI1Q96J88 318 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 CEP89Q96ST8 783 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 CWC25Q9NXE8 425 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 PXDNQ92626 1479 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 PRPF6O94906 941 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 AIDAQ96BJ3 306 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 BLZF1Q9H2G9 400 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 CPDO75976 1380 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 MACROD2A1Z1Q3 448 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 CPP00450 1065 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 IDEP14735 1019 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 ARHGAP25P42331 645 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 MRPS25P82663 173 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 C2orf54Q08AI8 447 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 NBPF14Q5TI25 921 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 GBP6Q6ZN66 633 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 KAT2BQ92831 832 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 DDX17Q92841 729 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 ZKSCAN3Q9BRR0 538 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 HAUS4Q9H6D7 363 aa14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-209ENST00000540469 TOPAZ1Q8N9V7 1692 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 ERICH2A1L162 156 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 ACTN4O43707 911 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 KRT86O43790 486 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 SPAG1Q07617 926 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 INCENPQ9NQS7 918 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 TRIM75PA6NK02 468 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 MMP1P03956 469 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 GUCY1A2P33402 732 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 RTN1Q16799 776 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 TMEM87BQ96K49 555 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 JPH2Q9BR39 696 aaPredicted RBP14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 GPR108Q9NPR9 543 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 TOB1P50616 345 aaPredicted RBP14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 COPB1P53618 953 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 SCARF1Q14162 830 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 NT5DC1Q5TFE4 455 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
SFSWAP-209ENST00000540469 OPA1O60313 960 aa14.43□□□□□ -0.1
SFSWAP-209ENST00000540469 ATP1A2P50993 1020 aa14.43□□□□□ -0.1
SFSWAP-209ENST00000540469 TRIM14Q14142 442 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms