RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SEC31BQ9NQW1 1179 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 STRN4Q9NRL3 753 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 CPP00450 1065 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 EFCAB13Q8IY85 973 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 CSRNP2Q9H175 543 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 ABHD10Q9NUJ1 306 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 PCDHB6Q9Y5E3 794 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 LRRC10BA6NIK2 292 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 RNF40O75150 1001 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 CABP4P57796 275 aa19.91■□□□□ 0.78
RAB40C-205ENST00000539661 NOA1Q8NC60 698 aaKnown RBP19.91■□□□□ 0.78
RAB40C-205ENST00000539661 LIMA1Q9UHB6 759 aaKnown RBP19.91■□□□□ 0.78
RAB40C-205ENST00000539661 CD44P16070 742 aaKnown RBP19.9■□□□□ 0.78
RAB40C-205ENST00000539661 GTF2A1P52655 376 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-205ENST00000539661 USP14P54578 494 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 ERVK-24P63145 666 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 SPAG1Q07617 926 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 RPGRIP1Q96KN7 1286 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-205ENST00000539661 TARSL2A2RTX5 802 aaKnown RBP19.9■□□□□ 0.78
RAB40C-205ENST00000539661 PRPF6O94906 941 aaKnown RBP19.9■□□□□ 0.78
RAB40C-205ENST00000539661 DEXIO95424 95 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 APPP05067 770 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 PACS2Q86VP3 889 aa19.9■□□□□ 0.78
RAB40C-205ENST00000539661 PPP1R3GB7ZBB8 358 aa19.89■□□□□ 0.78
RAB40C-205ENST00000539661 SYF2O95926 243 aaKnown RBP19.89■□□□□ 0.78
RAB40C-205ENST00000539661 TRAPPC11Q7Z392 1133 aa19.89■□□□□ 0.78
RAB40C-205ENST00000539661 CNNM2Q9H8M5 875 aa19.89■□□□□ 0.78
RAB40C-205ENST00000539661 TAOK2Q9UL54 1235 aa19.89■□□□□ 0.78
RAB40C-205ENST00000539661 JRKLQ9Y4A0 524 aa19.89■□□□□ 0.78
RAB40C-205ENST00000539661 IFIT3O14879 490 aaKnown RBP19.89■□□□□ 0.77
RAB40C-205ENST00000539661 KLHL10Q6JEL2 608 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 MYL10Q9BUA6 226 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 PSMD14O00487 310 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 CYP27B1O15528 508 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 PHACTR2O75167 634 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 RCAN1P53805 252 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 DPYDQ12882 1025 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 DNAJC21Q5F1R6 531 aaKnown RBP19.89■□□□□ 0.77
RAB40C-205ENST00000539661 PAGE5Q96GU1 130 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 KCNJ14Q9UNX9 436 aa19.89■□□□□ 0.77
RAB40C-205ENST00000539661 MYH8P13535 1937 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 UBE2Q2LH0YL09 131 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 GUCY1A2P33402 732 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 MCAMP43121 646 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 STX17P56962 302 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 MTA3Q9BTC8 594 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 TIAM2Q8IVF5 1701 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 CCDC196A0A1B0GTZ2 297 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 PI16Q6UXB8 463 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 USP49Q70CQ1 688 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 HPCAL4Q9UM19 191 aa19.88■□□□□ 0.77
RAB40C-205ENST00000539661 CHD4Q14839 1912 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 BMP15O95972 392 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
RAB40C-205ENST00000539661 RTN1Q16799 776 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 ZFP91Q96JP5 570 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-205ENST00000539661 PLA2G12BQ9BX93 195 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 KRT23Q9C075 422 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 HAUS4Q9H6D7 363 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 IQSEC3Q9UPP2 1182 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-205ENST00000539661 TFRCP02786 760 aaKnown RBP19.87■□□□□ 0.77
RAB40C-205ENST00000539661 GUCY2CP25092 1073 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 KRT31Q15323 416 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 NCAPH2Q6IBW4 605 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 ISCA1Q9BUE6 129 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 ZSWIM5Q9P217 1185 aa19.87■□□□□ 0.77
RAB40C-205ENST00000539661 A0A087WUV0 522 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 N4BP3O15049 544 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 SHOX2O60902 331 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 ABL1P00519 1130 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 TAF7LQ5H9L4 462 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 CRACR2BQ8N4Y2 399 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 COG1Q8WTW3 980 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 FERMT2Q96AC1 680 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 NUP88Q99567 741 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 GEMIN8Q9NWZ8 242 aaKnown RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 GOLGB1Q14789 3259 aaKnown RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 RIC1Q4ADV7 1423 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 TRIM75PA6NK02 468 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 CKAP4Q07065 602 aaKnown RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 ZNF662Q6ZS27 426 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 BRINP3Q76B58 766 aa19.86■□□□□ 0.77
RAB40C-205ENST00000539661 SUGP1Q8IWZ8 645 aaKnown RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 STRBPQ96SI9 672 aaKnown RBP19.86■□□□□ 0.77
RAB40C-205ENST00000539661 AFMP43652 599 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 NR5A1Q13285 461 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 ZBTB3Q9H5J0 574 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 RWDD2AQ9UIY3 292 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 EPN1Q9Y6I3 576 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 ZNF532Q9HCE3 1301 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 UBR2Q8IWV8 1755 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 CSF1RP07333 972 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 COPB1P53618 953 aaKnown RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 STIM1Q13586 685 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms