RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC26A6Q9BXS9 759 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 COL4A5P29400 1685 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 NFIAQ12857 509 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 NOLC1Q14978 699 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 MYRIPQ8NFW9 859 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 ALG1Q9BT22 464 aa19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 TTC12Q9H892 705 aaPredicted RBP19.78■□□□□ 0.76
PCDHB17P-201ENST00000539533 TSPY3P0CV98 308 aa19.77■□□□□ 0.76
PCDHB17P-201ENST00000539533 TSPY8P0CW00 308 aa19.77■□□□□ 0.76
PCDHB17P-201ENST00000539533 SSRP1Q08945 709 aaKnown RBP19.77■□□□□ 0.76
PCDHB17P-201ENST00000539533 DALRD3Q5D0E6 543 aaKnown RBP19.77■□□□□ 0.76
PCDHB17P-201ENST00000539533 FUCA2Q9BTY2 467 aa19.77■□□□□ 0.76
PCDHB17P-201ENST00000539533 RAD17O75943 681 aa19.77■□□□□ 0.75
PCDHB17P-201ENST00000539533 FMNL1O95466 1100 aaPredicted RBP19.77■□□□□ 0.75
PCDHB17P-201ENST00000539533 CACNB3P54284 484 aa19.77■□□□□ 0.75
PCDHB17P-201ENST00000539533 NBPF11Q86T75 865 aa19.77■□□□□ 0.75
PCDHB17P-201ENST00000539533 UTRNP46939 3433 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 CCDC196A0A1B0GTZ2 297 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 GUCY1A2P33402 732 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 HDLBPQ00341 1268 aaKnown RBP19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 TTC6Q86TZ1 520 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 ZFPM1Q8IX07 1006 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 ZNF287Q9HBT7 754 aa19.76■□□□□ 0.75
PCDHB17P-201ENST00000539533 PRIMPOLQ96LW4 560 aa19.75■□□□□ 0.75
PCDHB17P-201ENST00000539533 OSBPL5Q9H0X9 879 aaPredicted RBP19.75■□□□□ 0.75
PCDHB17P-201ENST00000539533 SERPINA10Q9UK55 444 aa19.75■□□□□ 0.75
PCDHB17P-201ENST00000539533 PSMD14O00487 310 aa19.75■□□□□ 0.75
PCDHB17P-201ENST00000539533 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
PCDHB17P-201ENST00000539533 DGKHQ86XP1 1220 aa19.74■□□□□ 0.75
PCDHB17P-201ENST00000539533 CCDC94Q9BW85 323 aaPredicted RBP19.74■□□□□ 0.75
PCDHB17P-201ENST00000539533 STK36Q9NRP7 1315 aa19.74■□□□□ 0.75
PCDHB17P-201ENST00000539533 DDAH1O94760 285 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 PLEKHA8P1O95397 391 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 PTGER2P43116 358 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 NT5C2P49902 561 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 GABPAQ06546 454 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 TCP10Q12799 353 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 PPP2R5BQ15173 497 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 C17orf53Q8N3J3 647 aaPredicted RBP19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 TCP11L1Q9NUJ3 509 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 SPTLC3Q9NUV7 552 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 CALM1P0DP23 149 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 CALM2P0DP24 149 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 CALM3P0DP25 149 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 CEBPZQ03701 1054 aaKnown RBP19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 KRT40Q6A162 431 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 RSBN1LQ6PCB5 846 aaPredicted RBP19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 TRIM22Q8IYM9 498 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 KAT14Q9H8E8 782 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 ECM29Q5VYK3 1845 aa19.73■□□□□ 0.75
PCDHB17P-201ENST00000539533 KIF28PB7ZC32 967 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 SLURP2P0DP57 97 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 ANKS1AQ92625 1134 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 SPATA32Q96LK8 384 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 SCAND2PQ9GZW5 306 aaPredicted RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 STX8Q9UNK0 236 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 VIL1P09327 827 aaKnown RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 FUT2Q10981 343 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 NEDD1Q8NHV4 660 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 LEO1Q8WVC0 666 aaPredicted RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 PRMT6Q96LA8 375 aaPredicted RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 TDRD3Q9H7E2 651 aaKnown RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 FAM198AQ9UFP1 575 aa19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 ZHX1Q9UKY1 873 aaPredicted RBP19.72■□□□□ 0.75
PCDHB17P-201ENST00000539533 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 PNMA1Q8ND90 353 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 VPS33BQ9H267 617 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 RBM28Q9NW13 759 aaKnown RBP19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 SERPINB13Q9UIV8 391 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 ZNRF3Q9ULT6 936 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 CD2APQ9Y5K6 639 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 DEXIO95424 95 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 KIF23Q02241 960 aaPredicted RBP19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 BCS1LQ9Y276 419 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 PSME4Q14997 1843 aa19.71■□□□□ 0.75
PCDHB17P-201ENST00000539533 USP28Q96RU2 1077 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 GMLQ99445 158 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 TMEM47Q9BQJ4 181 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 IDI2Q9BXS1 227 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 TAOK3Q9H2K8 898 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 ELP1O95163 1332 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 AP5Z1O43299 807 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 CCDC178Q5BJE1 867 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 TMTC3Q6ZXV5 915 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 WASF1Q92558 559 aa19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 RNF26Q9BY78 433 aaPredicted RBP19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 CFAP45Q9UL16 551 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms