RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 PI4KBQ9UBF8 816 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 MYH6P13533 1939 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 NMT2O60551 498 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 RAD17O75943 681 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
TDRD3-208ENST00000535286 DLGAP5Q15398 846 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 KRT40Q6A162 431 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 TMTC3Q6ZXV5 915 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
TDRD3-208ENST00000535286 GOLGA6L4A6NEF3 574 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
TDRD3-208ENST00000535286 NOVP48745 357 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 FOSBP53539 338 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 GUCY1B3Q02153 619 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 GPT2Q8TD30 523 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
TDRD3-208ENST00000535286 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 PPFIA3O75145 1194 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 FKBP1CQ5VVH2 108 aa12.04□□□□□ -0.48
TDRD3-208ENST00000535286 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 RPS12P25398 132 aaKnown RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 NFIAQ12857 509 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 GRM4Q14833 912 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 MYO1BO43795 1136 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 FUT2Q10981 343 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 ZSCAN29Q8IWY8 852 aaPredicted RBP12.03□□□□□ -0.48
TDRD3-208ENST00000535286 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
TDRD3-208ENST00000535286 LETM1O95202 739 aaPredicted RBP12.02□□□□□ -0.48
TDRD3-208ENST00000535286 MMP1P03956 469 aa12.02□□□□□ -0.48
TDRD3-208ENST00000535286 U2AF2P26368 475 aaKnown RBP eCLIP12.02□□□□□ -0.48
TDRD3-208ENST00000535286 SMARCA1P28370 1054 aa12.02□□□□□ -0.48
TDRD3-208ENST00000535286 CXCL9Q07325 125 aa12.02□□□□□ -0.48
TDRD3-208ENST00000535286 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.48
TDRD3-208ENST00000535286 FOXP1Q9H334 677 aaPredicted RBP12.02□□□□□ -0.48
TDRD3-208ENST00000535286 TDRD3Q9H7E2 651 aaKnown RBP12.02□□□□□ -0.48
TDRD3-208ENST00000535286 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.48
TDRD3-208ENST00000535286 COL4A5P29400 1685 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 NFKBIEO00221 500 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 L1TD1Q5T7N2 865 aaKnown RBP12.02□□□□□ -0.49
TDRD3-208ENST00000535286 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
TDRD3-208ENST00000535286 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 CEP95Q96GE4 821 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 PRMT6Q96LA8 375 aaPredicted RBP12.02□□□□□ -0.49
TDRD3-208ENST00000535286 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 MTMR4Q9NYA4 1195 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.49
TDRD3-208ENST00000535286 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
TDRD3-208ENST00000535286 YEATS4O95619 227 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 TTLL1O95922 423 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 SHMT1P34896 483 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 TCP10Q12799 353 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
TDRD3-208ENST00000535286 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 IGKV6D-41A0A0C4DH26 115 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 DEKP35659 375 aaKnown RBP12.01□□□□□ -0.49
TDRD3-208ENST00000535286 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
TDRD3-208ENST00000535286 ZNF445P59923 1031 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 KCNG4Q8TDN1 519 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
TDRD3-208ENST00000535286 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
TDRD3-208ENST00000535286 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 GOLGA6L3A6NEY3 463 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 FAM151AQ8WW52 585 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 SCG2P13521 617 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 AKR1B1P15121 316 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 GUCY1A2P33402 732 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 CACNB3P54284 484 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 ZSCAN23Q3MJ62 389 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 TATDN1Q6P1N9 297 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 FAM83AQ86UY5 434 aa12□□□□□ -0.49
TDRD3-208ENST00000535286 CMTR1Q8N1G2 835 aaKnown RBP12□□□□□ -0.49
TDRD3-208ENST00000535286 USP28Q96RU2 1077 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms