RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GUCY1A2P33402 732 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 USP14P54578 494 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 IRF5Q13568 498 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 SEPT2Q15019 361 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 UBE3CQ15386 1083 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 GLIPR1L2Q4G1C9 344 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 AMOTL1Q8IY63 956 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 SLC44A5Q8NCS7 719 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 ACER1Q8TDN7 264 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 SHISA4Q96DD7 197 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 DYNLL2Q96FJ2 89 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 CCDC136Q96JN2 1154 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 C12orf42Q96LP6 360 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 IPO9Q96P70 1041 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 PAGR1Q9BTK6 254 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 MORF4L1Q9UBU8 362 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 PLXNB2O15031 1838 aa10.28□□□□□ -0.76
SFSWAP-202ENST00000535202 CYP2D7A0A087X1C5 515 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 GJB1P08034 283 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 CCAR1Q8IX12 1150 aaKnown RBP10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 GPRC5AQ8NFJ5 357 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 NKX2-3Q8TAU0 364 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 GTF3C2Q8WUA4 911 aaPredicted RBP10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 PUS7LQ9H0K6 701 aaKnown RBP10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 SWAP70Q9UH65 585 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 SLC4A4Q9Y6R1 1079 aa10.27□□□□□ -0.77
SFSWAP-202ENST00000535202 SMIM22K7EJ46 135 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 VCAM1P19320 739 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 CYP2B6P20813 491 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 ANP32AP39687 249 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 GJA8P48165 433 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 ERVK-24P63145 666 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 Q3C1V9 767 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 TMEM179Q6ZVK1 233 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 KBTBD3Q8NAB2 608 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 RPAP3Q9H6T3 665 aaPredicted RBP10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 CWC22Q9HCG8 908 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 RBPJLQ9UBG7 517 aa10.26□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L12C9JPN9 530 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 USP17L21D6R901 530 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 AKR1B1P15121 316 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 MAPK4P31152 587 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 C12orf60Q5U649 245 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 CATSPERGQ6ZRH7 1159 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 CLEC10AQ8IUN9 316 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 U2AF1L4Q8WU68 220 aaKnown RBP10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 SOCS4Q8WXH5 440 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 DEFB118Q96PH6 123 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 PORCNQ9H237 461 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 GJD2Q9UKL4 321 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 BRCA2P51587 3418 aa10.25□□□□□ -0.77
SFSWAP-202ENST00000535202 A0A1W2PRG0 241 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 ERC2O15083 957 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 RNF113AO15541 343 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 CNMDO75829 334 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 FARP2O94887 1054 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 SGPL1O95470 568 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 HMGCRP04035 888 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 CDK8P49336 464 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 ICA1Q05084 483 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 TRIM32Q13049 653 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 WDR78Q5VTH9 848 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 POTEEQ6S8J3 1075 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 C16orf86Q6ZW13 317 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 GPR142Q7Z601 462 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 STK11IPQ8N1F8 1099 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 APPBP2Q92624 585 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 STRBPQ96SI9 672 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.771e-9■■■■■ 54.1
SFSWAP-202ENST00000535202 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 ARPP21Q9UBL0 812 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 ZBTB47Q9UFB7 747 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 TTC41PQ6P2S7 1318 aa10.24□□□□□ -0.77
SFSWAP-202ENST00000535202 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-202ENST00000535202 M0R2C6 588 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms