RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 CATSPERGQ6ZRH7 1159 aa15.93■□□□□ 0.14
COPB1-209ENST00000533096 METTL16Q86W50 562 aaKnown RBP15.93■□□□□ 0.14
COPB1-209ENST00000533096 GTF3C2Q8WUA4 911 aaPredicted RBP15.93■□□□□ 0.14
COPB1-209ENST00000533096 COL25A1Q9BXS0 654 aaPredicted RBP15.93■□□□□ 0.14
COPB1-209ENST00000533096 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
COPB1-209ENST00000533096 DDX20Q9UHI6 824 aaKnown RBP15.93■□□□□ 0.14
COPB1-209ENST00000533096 ATP11BQ9Y2G3 1177 aa15.93■□□□□ 0.14
COPB1-209ENST00000533096 MYH2Q9UKX2 1941 aa15.93■□□□□ 0.14
COPB1-209ENST00000533096 MGAMO43451 1857 aa15.93■□□□□ 0.14
COPB1-209ENST00000533096 SLC15A5A6NIM6 579 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 POTEB2H3BUK9 544 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 TRIM27P14373 513 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 ABCB5Q2M3G0 1257 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
COPB1-209ENST00000533096 GJC2Q5T442 439 aaPredicted RBP15.92■□□□□ 0.14
COPB1-209ENST00000533096 DPP9Q86TI2 863 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.92■□□□□ 0.14
COPB1-209ENST00000533096 MAGEB6Q8N7X4 407 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 NPLOC4Q8TAT6 608 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 BTBD7Q9P203 1132 aa15.92■□□□□ 0.14
COPB1-209ENST00000533096 COL2A1P02458 1487 aaPredicted RBP15.91■□□□□ 0.14
COPB1-209ENST00000533096 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
COPB1-209ENST00000533096 GUCD1Q96NT3 240 aa15.91■□□□□ 0.14
COPB1-209ENST00000533096 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
COPB1-209ENST00000533096 PRDM5Q9NQX1 630 aaPredicted RBP15.91■□□□□ 0.14
COPB1-209ENST00000533096 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
COPB1-209ENST00000533096 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
COPB1-209ENST00000533096 POLR3DP05423 398 aaPredicted RBP15.9■□□□□ 0.14
COPB1-209ENST00000533096 USP14P54578 494 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 RTP1P59025 263 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 ATP8B2P98198 1209 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 PRAMEF19Q5SWL8 479 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 TATDN1Q6P1N9 297 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 TTC6Q86TZ1 520 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 TRPV1Q8NER1 839 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 LPAR1Q92633 364 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
COPB1-209ENST00000533096 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 TLR7Q9NYK1 1049 aaKnown RBP15.9■□□□□ 0.14
COPB1-209ENST00000533096 SERPINB13Q9UIV8 391 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 DOCK1Q14185 1865 aa15.9■□□□□ 0.14
COPB1-209ENST00000533096 VCAM1P19320 739 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 PLCD1P51178 756 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 SHHQ15465 462 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 ZNF697Q5TEC3 545 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 TMEM57Q8N5G2 664 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 FERMT2Q96AC1 680 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
COPB1-209ENST00000533096 MYH13Q9UKX3 1938 aa15.88■□□□□ 0.13
COPB1-209ENST00000533096 POLA2Q14181 598 aa15.88■□□□□ 0.13
COPB1-209ENST00000533096 PLS1Q14651 629 aa15.88■□□□□ 0.13
COPB1-209ENST00000533096 FAM109BQ6ICB4 259 aaPredicted RBP15.88■□□□□ 0.13
COPB1-209ENST00000533096 C12orf42Q96LP6 360 aa15.88■□□□□ 0.13
COPB1-209ENST00000533096 ANTXR1Q9H6X2 564 aa15.88■□□□□ 0.13
COPB1-209ENST00000533096 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
COPB1-209ENST00000533096 DNM1LO00429 736 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 MSCO60682 206 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 COG2Q14746 738 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 SEPT2Q15019 361 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 SLC39A5Q6ZMH5 540 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 BADQ92934 168 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 EAF2Q96CJ1 260 aaPredicted RBP15.87■□□□□ 0.13
COPB1-209ENST00000533096 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
COPB1-209ENST00000533096 CDX2Q99626 313 aaPredicted RBP15.87■□□□□ 0.13
COPB1-209ENST00000533096 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
COPB1-209ENST00000533096 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 PHIPQ8WWQ0 1821 aa15.87■□□□□ 0.13
COPB1-209ENST00000533096 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
COPB1-209ENST00000533096 KBTBD13C9JR72 458 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 HOXC6P09630 235 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 ADCYAP1R1P41586 468 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 GRB14Q14449 540 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 C9orf50Q5SZB4 431 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
COPB1-209ENST00000533096 DOCK3Q8IZD9 2030 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 ERCC3P19447 782 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 ADORA2AP29274 412 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 GUCY1A2P33402 732 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 SHMT1P34896 483 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 TRIM60Q495X7 471 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 NCAPG2Q86XI2 1143 aa15.85■□□□□ 0.13
COPB1-209ENST00000533096 MAGEB6P1A0A0J9YX57 407 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 A0A1W2PRG0 241 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 STRNO43815 780 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 COBLO75128 1261 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 EVX2Q03828 476 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 EHD4Q9H223 541 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 MCM9Q9NXL9 1143 aa15.84■□□□□ 0.13
COPB1-209ENST00000533096 DDX60LQ5H9U9 1706 aaKnown RBP15.84■□□□□ 0.13
COPB1-209ENST00000533096 CYBAP13498 195 aa15.83■□□□□ 0.12
COPB1-209ENST00000533096 LBX2Q6XYB7 198 aa15.83■□□□□ 0.12
COPB1-209ENST00000533096 AACSQ86V21 672 aa15.83■□□□□ 0.12
COPB1-209ENST00000533096 SPICE1Q8N0Z3 855 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms