RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 GOLGA8FQ08AF8 430 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 GOLGA8DPQ0D2H9 430 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 VCAM1P19320 739 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 FBXW4P57775 412 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CCT5P48643 541 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 RWDD2BP57060 319 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 PSMD2Q13200 908 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SMYD2Q9NRG4 433 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SLC9A1P19634 815 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 ST13P50502 369 aaKnown RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 YIPF3Q9GZM5 350 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 GRIN1Q05586 938 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 MAP3K12Q12852 859 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 GINS4Q9BRT9 223 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 KLHL31Q9H511 634 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 CUX1P39880 1505 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 WASHC5Q12768 1159 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 HDAC4P56524 1084 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 ARMC2Q8NEN0 867 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 ELP1O95163 1332 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 TSTA3Q13630 321 aaPredicted RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 EXOC5O00471 708 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 EEF1GP26641 437 aaKnown RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 SERPINB10P48595 397 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 ASPHQ12797 758 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 BFSP1Q12934 665 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 C6orf118Q5T5N4 469 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 C4orf50Q6ZRC1 276 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 MYRIPQ8NFW9 859 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 KIF17Q9P2E2 1029 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
PDE4DIP-227ENST00000529945 KRT17Q04695 432 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 ART3Q13508 389 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 CARD6Q9BX69 1037 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 THAP12O43422 761 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 TNNC2P02585 160 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 EPB41P11171 864 aaKnown RBP13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 SLC13A4Q9UKG4 626 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 WDR47O94967 919 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 ECE1P42892 770 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 GRAMD1BQ3KR37 738 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 NOSTRINQ8IVI9 506 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 MYH9P35579 1960 aaKnown RBP13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 ZSCAN22P10073 491 aaPredicted RBP13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 STX17P56962 302 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 ZNF263O14978 683 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 SUPT3HO75486 399 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
PDE4DIP-227ENST00000529945 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 DHX58Q96C10 678 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 PDE4BQ07343 736 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 CYTH2Q99418 400 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 UTP6Q9NYH9 597 aaKnown RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 NKTRP30414 1462 aaKnown RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 ORC3Q9UBD5 711 aaPredicted RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 CAB39Q9Y376 341 aaPredicted RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 BMP15O95972 392 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 SYCE1Q8N0S2 351 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 CCDC197Q8NCU1 140 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 TEX12Q9BXU0 123 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 CABP4P57796 275 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 FAM8A1Q9UBU6 413 aa13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 KHDRBS2Q5VWX1 349 aaKnown RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 SND1Q7KZF4 910 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
PDE4DIP-227ENST00000529945 ARHGEF3Q9NR81 526 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 STX18Q9P2W9 335 aaKnown RBP13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 NUMA1Q14980 2115 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 TRIM15Q9C019 465 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 NACADO15069 1562 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 ASIC2Q16515 512 aa13.9□□□□□ -0.18
PDE4DIP-227ENST00000529945 ATAD3BQ5T9A4 648 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms