RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 ERVK-24P63145 666 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 TRIB2Q92519 343 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 PORCNQ9H237 461 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 CHMP4BQ9H444 224 aaKnown RBP16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 ARMT1Q9H993 441 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 CYP2D6P10635 497 aa16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 GABPAQ06546 454 aa16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L15C9J2P7 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L13C9JLJ4 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L11C9JVI0 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L18D6R9N7 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L22D6RA61 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L17D6RBQ6 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L19D6RCP7 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L20D6RJB6 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 MPHOSPH10O00566 681 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 PRKAB2O43741 272 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 CHGBP05060 677 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 ATP5JP18859 108 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 VCAM1P19320 739 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 MAPK4P31152 587 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 ADD2P35612 726 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP14P54578 494 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 USP17L24Q0WX57 530 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 SEPT2Q15019 361 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 CHRDL2Q6WN34 429 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
CNKSR1-210ENST00000525687 SMARCA5O60264 1052 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 CNMDO75829 334 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 MBD4O95243 580 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 PDE3AQ14432 1141 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 CATSPERGQ6ZRH7 1159 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 DIS3LQ8TF46 1054 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 SOCS4Q8WXH5 440 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 PAWRQ96IZ0 340 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 HAUS7Q99871 368 aa16.41■□□□□ 0.22
CNKSR1-210ENST00000525687 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 RABGAP1Q9Y3P9 1069 aa16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
CNKSR1-210ENST00000525687 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 CCL14Q16627 93 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 MORN1Q5T089 497 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 WDR78Q5VTH9 848 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 USP6NLQ92738 828 aa16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.21
CNKSR1-210ENST00000525687 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 EVI5O60447 810 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 CAPN2P17655 700 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 RGS2P41220 211 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 MAP3K21Q5TCX8 1036 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 NECAB2Q7Z6G3 386 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-210ENST00000525687 CCNA1P78396 465 aa16.37■□□□□ 0.21
CNKSR1-210ENST00000525687 CACNB2Q08289 660 aaPredicted RBP16.37■□□□□ 0.21
CNKSR1-210ENST00000525687 APBA2Q99767 749 aa16.37■□□□□ 0.21
CNKSR1-210ENST00000525687 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
CNKSR1-210ENST00000525687 SWAP70Q9UH65 585 aa16.37■□□□□ 0.21
CNKSR1-210ENST00000525687 USP17L12C9JPN9 530 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 USP17L21D6R901 530 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 AKR1B1P15121 316 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 TRMT44Q8IYL2 757 aaKnown RBP16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 ANKLE1Q8NAG6 615 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 PUS7LQ9H0K6 701 aaKnown RBP16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 SLC4A4Q9Y6R1 1079 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 CEP290O15078 2479 aa16.36■□□□□ 0.21
CNKSR1-210ENST00000525687 MYH7P12883 1935 aa16.35■□□□□ 0.21
CNKSR1-210ENST00000525687 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
CNKSR1-210ENST00000525687 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
CNKSR1-210ENST00000525687 CDK8P49336 464 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms