RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SLX4Q8IY92 1834 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 CNTNAP5Q8WYK1 1306 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 KIF5BP33176 963 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 CDK8P49336 464 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 TYRO3Q06418 890 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 SRBD1Q8N5C6 995 aaKnown RBP21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 UPF1Q92900 1129 aaKnown RBP eCLIP21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 TRIM44Q96DX7 344 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 MAP3K14Q99558 947 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 DBNDD1Q9H9R9 158 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1.01
TRAPPC9-210ENST00000521667 USP17L3A6NCW0 530 aa21.33■■□□□ 1
TRAPPC9-210ENST00000521667 USP17L4A6NCW7 530 aa21.33■■□□□ 1
TRAPPC9-210ENST00000521667 CTAGE5O15320 804 aa21.33■■□□□ 1
TRAPPC9-210ENST00000521667 KINO60870 393 aaKnown RBP21.33■■□□□ 1
TRAPPC9-210ENST00000521667 USP17L1Q7RTZ2 530 aa21.33■■□□□ 1
TRAPPC9-210ENST00000521667 PNMA1Q8ND90 353 aa21.33■■□□□ 1
TRAPPC9-210ENST00000521667 PPP6R2O75170 966 aa21.32■■□□□ 1
TRAPPC9-210ENST00000521667 PTPAQ15257 358 aa21.32■■□□□ 1
TRAPPC9-210ENST00000521667 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
TRAPPC9-210ENST00000521667 ATF5Q9Y2D1 282 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-210ENST00000521667 R3HDM1Q15032 1099 aaKnown RBP21.31■■□□□ 1
TRAPPC9-210ENST00000521667 AXDND1Q5T1B0 1012 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-210ENST00000521667 HHIPL2Q6UWX4 724 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 FMR1NBQ8N0W7 255 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-210ENST00000521667 JMYQ8N9B5 988 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 VPS54Q9P1Q0 977 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 MRVI1Q9Y6F6 885 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 SNED1Q8TER0 1413 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 hCG_1642624A0A1W2PR95 340 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 SHISA4Q96DD7 197 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 PHF20Q9BVI0 1012 aa21.31■■□□□ 1
TRAPPC9-210ENST00000521667 A0A1B0GVL5 298 aa21.3■■□□□ 1
TRAPPC9-210ENST00000521667 SCNN1DP51172 638 aa21.3■■□□□ 1
TRAPPC9-210ENST00000521667 RILPL1Q5EBL4 403 aa21.3■■□□□ 1
TRAPPC9-210ENST00000521667 SASS6Q6UVJ0 657 aa21.3■■□□□ 1
TRAPPC9-210ENST00000521667 TEKT1Q969V4 418 aa21.3■■□□□ 1
TRAPPC9-210ENST00000521667 WDHD1O75717 1129 aaPredicted RBP21.29■■□□□ 1
TRAPPC9-210ENST00000521667 CMA1P23946 247 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 MARCKSP29966 332 aaPredicted RBP21.29■■□□□ 1
TRAPPC9-210ENST00000521667 NDUFA8P51970 172 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 FKBP1AP62942 108 aaKnown RBP21.29■■□□□ 1
TRAPPC9-210ENST00000521667 NR5A1Q13285 461 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 PICALMQ13492 652 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 NEDD1Q8NHV4 660 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 OXER1Q8TDS5 423 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 USP40Q9NVE5 1235 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 ECE2O60344 883 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 GRM4Q14833 912 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 STRIP1Q5VSL9 837 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 KCNQ5Q9NR82 932 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.29■■□□□ 1
TRAPPC9-210ENST00000521667 STX8Q9UNK0 236 aa21.29■■□□□ 1
TRAPPC9-210ENST00000521667 KRT2P35908 639 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 TOB1P50616 345 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-210ENST00000521667 CC2D2BQ6DHV5 1058 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 FAM200AQ8TCP9 573 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 TMEM47Q9BQJ4 181 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 FOCADQ5VW36 1801 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 GNAQP50148 359 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
TRAPPC9-210ENST00000521667 DDX4Q9NQI0 724 aaKnown RBP21.28■■□□□ 1
TRAPPC9-210ENST00000521667 SCG2P13521 617 aa21.27■■□□□ 1
TRAPPC9-210ENST00000521667 CRKP46108 304 aa21.27■■□□□ 1
TRAPPC9-210ENST00000521667 PFKFB3Q16875 520 aaPredicted RBP21.27■■□□□ 1
TRAPPC9-210ENST00000521667 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
TRAPPC9-210ENST00000521667 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
TRAPPC9-210ENST00000521667 ANO6Q4KMQ2 910 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 DACT2Q5SW24 774 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 BRMS1Q9HCU9 246 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 PFKFB1P16118 471 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 GABPAQ06546 454 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 SUPT20HQ8NEM7 779 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 MAD2L2Q9UI95 211 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 MYH1P12882 1939 aa21.26■□□□□ 0.99
TRAPPC9-210ENST00000521667 CUTAO60888 179 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 KIAA2012Q0VF49 1180 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 AOC3Q16853 763 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 STAG2Q8N3U4 1231 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 ZDHHC15Q96MV8 337 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 CABP5Q9NP86 173 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 USP25Q9UHP3 1055 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 MYH6P13533 1939 aa21.25■□□□□ 0.99
TRAPPC9-210ENST00000521667 DPEP1P16444 411 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 KIAA0825Q8IV33 1275 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 SDF4Q9BRK5 362 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 OSBPL5Q9H0X9 879 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 NOVP48745 357 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 HDLBPQ00341 1268 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 NPY5RQ15761 445 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 SHC4Q6S5L8 630 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 KRI1Q8N9T8 703 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 CEP131Q9UPN4 1083 aa21.24■□□□□ 0.99
TRAPPC9-210ENST00000521667 PLIN4Q96Q06 1357 aa21.23■□□□□ 0.99
TRAPPC9-210ENST00000521667 FAM237AA0A1B0GTK4 181 aa21.23■□□□□ 0.99
TRAPPC9-210ENST00000521667 PALM3A6NDB9 673 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms